Item | Value |
---|---|
gene id | CI01000306_05680240_05680527 |
gene name | NA |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000306 |
NCBI id | null |
chromosome length | 11491657 |
location | 5679746 ~ 5681035 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000306_05680240_05680527.mRNA | True | 1290 | mRNA | 0.45 | 1 | 5679746 | 5681035 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000306_05650597_05655729 | NA | coding | upstream | 23793 | 5650597 ~ 5655953 (+) |
CI01000306_05617258_05617548 | NA | coding | upstream | 61656 | 5617258 ~ 5618090 (+) |
CI01000306_05581415_05587605 | GRPR | coding | upstream | 92085 | 5581268 ~ 5587661 (+) |
CI01000306_05568573_05569674 | NA | coding | upstream | 109758 | 5568371 ~ 5569988 (+) |
CI01000306_05525004_05533724 | RPGRB | coding | upstream | 146022 | 5525004 ~ 5533724 (+) |
CI01000306_05740500_05745336 | NHSB, NHS | coding | downstream | 59286 | 5740321 ~ 5745473 (+) |
CI01000306_05755968_05757253 | NA | coding | downstream | 74744 | 5755779 ~ 5757390 (+) |
CI01000306_05805669_05822854 | CDKL5 | coding | downstream | 124634 | 5805669 ~ 5823408 (+) |
CI01000306_05826877_05830536 | RS1, RS1A | coding | downstream | 145046 | 5826081 ~ 5831069 (+) |
CI01000306_05835418_05846769 | PPEF1 | coding | downstream | 154383 | 5835418 ~ 5846959 (+) |
G432947 | NA | non-coding | upstream | 6451 | 5664915 ~ 5673295 (+) |
G433070 | NA | non-coding | upstream | 105673 | 5573601 ~ 5574073 (+) |
G433066 | NA | non-coding | upstream | 114508 | 5565027 ~ 5565238 (+) |
G433065 | NA | non-coding | upstream | 116074 | 5563418 ~ 5563672 (+) |
G432970 | NA | non-coding | upstream | 156823 | 5522161 ~ 5522923 (+) |
G432991 | NA | non-coding | downstream | 204165 | 5885200 ~ 5887156 (+) |
G433120 | NA | non-coding | downstream | 209926 | 5890961 ~ 5891184 (+) |
G432961 | NA | non-coding | downstream | 210825 | 5891860 ~ 5892292 (+) |
G433123 | NA | non-coding | downstream | 226252 | 5907287 ~ 5909232 (+) |
G432958 | NA | other | upstream | 19577 | 5658928 ~ 5660169 (+) |
G432678 | NA | other | upstream | 1157210 | 4522182 ~ 4522536 (+) |
G432583 | NA | other | upstream | 1351924 | 4326402 ~ 4327822 (+) |
CI01000306_03807268_03810946 | NA | other | upstream | 1870748 | 3807268 ~ 3811243 (+) |
CI01000306_03778075_03781910 | MAP1LC3A, MAP1LC3A.L | other | upstream | 1896727 | 3778052 ~ 3783019 (+) |
CI01000306_05976516_05985251 | TMEM178A, TMEM178 | other | downstream | 299478 | 5975822 ~ 5986288 (+) |
CI01000306_06106248_06107449 | GM2573, CS056, WDR83OS | other | downstream | 425108 | 6106143 ~ 6108175 (+) |
G433724 | NA | other | downstream | 427576 | 6108611 ~ 6129778 (+) |
G434545 | NA | other | downstream | 1438282 | 7119317 ~ 7119859 (+) |
CI01000306_09225597_09230504 | NA | other | downstream | 3544530 | 9225512 ~ 9231333 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
bowfin (Amia calva) | AMCG00014162 | nhs,LOC103378685 | coding | CM030128.1 | CM030128.1 | 3044338 ~ 3044745 (+) |