CI01000306_05755968_05757253


Basic Information

Item Value
gene id CI01000306_05755968_05757253
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5755779 ~ 5757390 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_05755968_05757253.mRNA
CTATAAATAATTTTGCTGTTTATATTTGCAAGTCTCTTGTTTAAGTCATCCATTGACACGGAATGCAAAAACATTGTTTTGATGATACCTCTTTTTTCCCTACCAGAAACACACAGAGCTCAATCACAAGGACTTTTATGAAGTTTGGCATCTCTTTTGAGTGGAAACTCCAGGTCTTATGAGTCTAAAATGGAGGACCTTCAAACAAAAGAGGTAAAGAAACATCAGACCAACACAGAAATACCAGATCAGACTATTGTTGGGTTTTCTCCCTTGATTGTGCCTGCTTCAAGCGCAAGAGCCATGGTCCTGGATCAGCATTTGAACCCCAAACTTCCACCTTCTGCAAACTCTTGTCCATTTCCCAATATTCAGACAAGTGAAAACCTGCTTTTGAGTCAACCAGAAGCTTGGGTTTACAACACAGATGTACCAATGTTTCAAAACCCTGGAACTGCCACATGTTTGCAAGATCTACAACCTTCTCTGACCAATTATGCTTTGTCAGAGAATCAATTCACTGGTCCAGACCAGCCAATCCCTTTAACTTCAAACTTCATGCCACATGAAACTGTTCAGCCCACTAGCACACCAATGACCTCATTGATCCCTCCAGCAACCTTGTTGGTACCTTATCCAGTTGTGGTCCCGTTACCAGTGCCGTTGCCCATACCAATCCCAATCCCTATCCAAATCCATCAGAGTTTAGACTCAAAAGCTTTTATTAAAACTTCCAGAATGGGTTATATGATTGACAAAAGCATGCAGACCTCACCTAAAATCTCTTGCTGTACCAGTAGCATGGCCTACCCCATATTTCCACATACCCCAACAGAGTCTCAGGACGAGGTGCTAGACCTCTCACTTAAAGCAACCCAAATCAAGCAGGAACATTTGTTATCTGCTTCACCAAATTCACCACTGGATCTATCCTTGGTAAGCTCAAATAGTAGATGTTGGCATGATGATATGAATGGACAAAACACACAATACAAAGAGGCAATACATGAAGGCAATGGAAACAACATCACAGGTTCAACGTATGAAGACTACAATGGCAGGATTGTGCACTCAACTAAAACAGTCAAAGTCTTCGTGTCGCCCACAGAGACTGTTCTTGCCACTTTCTGTGACAAACGAAGAGGTTTCTCACAGGACTACATGATAAACTTACCCATGAAACCAGACAGGAGCCAAGATATTGGGCCACAGGACAGCTTTAGTAGATCATCCCGAGCTACACTACAGAGTAAACTACAGAGAAGTGTACATTTCAAAAGGGACGGGTCACAAAAAAATGTATGGGAAAACATATAAGAAAGAGAATCTGGCTTCTTTTCTGCCCAGAAAATAGATGAAAATAAGCACATGCTATGTAGAACTAGTTTTTGTGTTGCAGACTATTTCAAAACCTGTTTTTTTTTTTTTTTTTTGGACAAGGAAACCATGTTATA

Function

NR:

description
retinoic acid-induced protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_05755968_05757253.mRNA False 1454 mRNA 0.41 2 5755779 5757390

Neighbor

gene id symbol gene type direction distance location
CI01000306_05740500_05745336 NHSB, NHS coding upstream 10306 5740321 ~ 5745473 (+)
CI01000306_05680240_05680527 NA coding upstream 74744 5679746 ~ 5681035 (+)
CI01000306_05650597_05655729 NA coding upstream 99826 5650597 ~ 5655953 (+)
CI01000306_05617258_05617548 NA coding upstream 137689 5617258 ~ 5618090 (+)
CI01000306_05581415_05587605 GRPR coding upstream 168118 5581268 ~ 5587661 (+)
CI01000306_05805669_05822854 CDKL5 coding downstream 48279 5805669 ~ 5823408 (+)
CI01000306_05826877_05830536 RS1, RS1A coding downstream 68691 5826081 ~ 5831069 (+)
CI01000306_05835418_05846769 PPEF1 coding downstream 78028 5835418 ~ 5846959 (+)
CI01000306_05848803_05855772 NA coding downstream 91413 5848803 ~ 5855873 (+)
CI01000306_05857348_05858295 UGT1B7 coding downstream 99958 5857348 ~ 5859414 (+)
G432947 NA non-coding upstream 82484 5664915 ~ 5673295 (+)
G433070 NA non-coding upstream 181706 5573601 ~ 5574073 (+)
G433066 NA non-coding upstream 190541 5565027 ~ 5565238 (+)
G433065 NA non-coding upstream 192107 5563418 ~ 5563672 (+)
G432970 NA non-coding upstream 232856 5522161 ~ 5522923 (+)
G432991 NA non-coding downstream 127810 5885200 ~ 5887156 (+)
G433120 NA non-coding downstream 133571 5890961 ~ 5891184 (+)
G432961 NA non-coding downstream 134470 5891860 ~ 5892292 (+)
G433123 NA non-coding downstream 149897 5907287 ~ 5909232 (+)
G433134 NA non-coding downstream 164835 5922225 ~ 5972106 (+)
G432958 NA other upstream 95610 5658928 ~ 5660169 (+)
G432678 NA other upstream 1233243 4522182 ~ 4522536 (+)
G432583 NA other upstream 1427957 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1946781 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1972760 3778052 ~ 3783019 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 223123 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 348753 6106143 ~ 6108175 (+)
G433724 NA other downstream 351221 6108611 ~ 6129778 (+)
G434545 NA other downstream 1361927 7119317 ~ 7119859 (+)
CI01000306_09225597_09230504 NA other downstream 3468175 9225512 ~ 9231333 (+)

Expression


Co-expression Network