CI01000306_05857348_05858295 (UGT1B7)


Basic Information

Item Value
gene id CI01000306_05857348_05858295
gene name UGT1B7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5857348 ~ 5859414 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_05857348_05858295.mRNA
ATGCATCTCTCCTCGAGTACGCTCTTTGAACATGGAGACCCAAAGATGAGATTGGTTACATTTGTGGGGTGCCTCATGCTTGCTTTTGCAGATGTGGGAGAGACGATACAGCCTAGAAACCCTGGTTGGACAGGTTCGCTTTTAGTGGTGCCCATGGACGGAAGTCACTGGACTGGTGTGAAGGCTGTAGCGGAGGAGATGGGCCGCAGGGGTCACAAAGTGATGGTGGTCATTCCAGAGGTCAGTGTACTGCTAGGACCTGGTAAACACTACGCTACTAGAACATTTCCGGTTCCATATGGACAGCAAAAACTGGATGAACTCCAAGCTCGGAGTGCTGAGGTGATGGATAGTAAGCAGCAGCCTCTGTTGGAGAAGATCAGCACCAGAATCAGTAACTTGAGGAAATTTGTAGACCTCCAAAGGGCCACAGCTGAGAGTCTCCTCTTAAACCAAGAGCTGGTGGATTTCCTGAGGAAGCAGAATTTTGATGCGGTACTCACCAGCCCAGCTGTGCCAACTGGTGCCATCCTGGCTTATAACCTCTCCTTACCTGCTGTGTATATGTTGCGAGGCTTACCCTGCGGACTAGACTCGACGGCCACAGCCTGCCCAAACCCTCCCTCTTACACCCCACGGTTCTTTACACACAATTCAGACCGTATGTCTTTTCGTCAACGTGTGCTGAACGTTCTAGTGAGCATCCTGGAGCCTTTGCTCTGCAAACTGATATATTGGTCAATTGAGGATGTAGCATCCCGTTTCCTGCAGAGAGATGTGAGTGTGGCGGAGATCCTGCGAAGTGGAGCTCTGTGGCTACTGCGGTATGATTTCAGCTTGGAGTTTCCTAAACCCTTGATGCCAAACATGGTTTTAATCGGGGGGATTAACTGTGCCGTGAAAATTTCTCTGACTAAGGTAAGTGCAGAGATGTTTGTAAACATTTGAATGGATCCTTAGAGGGTTAGTTCACCCAAAAGTGAAAATTCTTTTTCTCACCCTCATGTCGTTCCAAACCCGTAAGACTTTCGTTCATCTTCAGAACGCAAATGAAGATATTTTTAATGAAATCTGAGCAATTTCTATCCCTCCATAGACAGCTATGCAACTACCATGCTTCAAAACGTTCATAAAAAGATTGTAAAACTAATCCATATGAATTGAGTTGTTTCAATGTAAGATACGCTTACTTGTATTCTACTTGAGATACTACGATGAAAAGACCAGGTTTGATTACATATACTTGGAATTAATGGTTTGATTTCTTGTCTTTTCTTTCTTCAGTAATTTCATCTTGTGAGCTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTTATTACTCATGCTCATGGCGTTCCAGACCCGTAAGACCTTCATTAATCTTCGGAATGCAAATTGAGTTATTTTTGTTTAAATCCGATGGCTCCGTGAGGCCTACATAAGGAGCAATGACATTTCCTCTCTCAAGATCCATAAAGGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGCGACGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCCTCTCTCAAGATCCATAAAGGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGCGACGAGAATATTTTTGGTGTGCCAAAAAAAAAAAAAAAAAAAAAAATGATGGCCGATTTCAAAACACTGCTTCAGGAAGCTTCGGAGCGTTACGAATCAGCACGTCGAATCCGGCATGAGGGTGAGTAATTAATGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAACTAATCACTTGTCTCCACCTACCATATAACTGATGCATCATGATGTGTGGAGGTTTGGTTGTAACTTTGTTCAGGTATCAACAGTTTAGCACTGTCAATA

Function

symbol description
ugt1b7 Enables glucuronosyltransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in intestine; liver; muscle; and testis. Human ortholog(s) of this gene implicated in several diseases, including bilirubin metabolic disorder (multiple); cholecystolithiasis; cholelithiasis; female reproductive organ cancer (multiple); and hepatitis B. Orthologous to human UGT1A1 (UDP glucuronosyltransferase family 1 member A1).

NR:

description
UDP glucuronosyltransferase 1 family a, b

GO:

id name namespace
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_05857348_05858295.mRNA True 2067 mRNA 0.39 1 5857348 5859414

Neighbor

gene id symbol gene type direction distance location
CI01000306_05848803_05855772 NA coding upstream 1475 5848803 ~ 5855873 (+)
CI01000306_05835418_05846769 PPEF1 coding upstream 10389 5835418 ~ 5846959 (+)
CI01000306_05826877_05830536 RS1, RS1A coding upstream 26279 5826081 ~ 5831069 (+)
CI01000306_05805669_05822854 CDKL5 coding upstream 33940 5805669 ~ 5823408 (+)
CI01000306_05755968_05757253 NA coding upstream 99958 5755779 ~ 5757390 (+)
CI01000306_05864099_05864974 NA coding downstream 4685 5864099 ~ 5864974 (+)
CI01000306_05870047_05877183 UGT1B1 coding downstream 9924 5869338 ~ 5877194 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 coding downstream 116408 5975822 ~ 5986288 (+)
CI01000306_06051975_06053165 TMEM246 coding downstream 192024 6051438 ~ 6054765 (+)
CI01000306_06055478_06066083 NA coding downstream 196064 6055478 ~ 6066413 (+)
G432947 NA non-coding upstream 184053 5664915 ~ 5673295 (+)
G433070 NA non-coding upstream 283275 5573601 ~ 5574073 (+)
G433066 NA non-coding upstream 292110 5565027 ~ 5565238 (+)
G433065 NA non-coding upstream 293676 5563418 ~ 5563672 (+)
G432991 NA non-coding downstream 25786 5885200 ~ 5887156 (+)
G433120 NA non-coding downstream 31547 5890961 ~ 5891184 (+)
G432961 NA non-coding downstream 32446 5891860 ~ 5892292 (+)
G433123 NA non-coding downstream 47873 5907287 ~ 5909232 (+)
G433134 NA non-coding downstream 62811 5922225 ~ 5972106 (+)
G432958 NA other upstream 197179 5658928 ~ 5660169 (+)
G432678 NA other upstream 1334812 4522182 ~ 4522536 (+)
G432583 NA other upstream 1529526 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 2048350 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 2074329 3778052 ~ 3783019 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 246729 6106143 ~ 6108175 (+)
G433724 NA other downstream 249197 6108611 ~ 6129778 (+)
G434545 NA other downstream 1259903 7119317 ~ 7119859 (+)
CI01000306_09225597_09230504 NA other downstream 3366151 9225512 ~ 9231333 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location