CI01000306_05864099_05864974


Basic Information

Item Value
gene id CI01000306_05864099_05864974
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5864099 ~ 5864974 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_05864099_05864974.mRNA
ATGCACTTAGCAGTAATCTTATGTCTAGTGATCAGTATAGTCTGTTGTGCAGCGCTGGAACAGAGTCCGTCTGGGAAGAGCGGTTGGACTGGGAAGCTGTTAGTGGTACCAATGGATGGAAGTCACTGGACAGGAGTGAAGGCCGTGGCAGAAGAGATGGGACGCAGAGGTCACACAGTGATTGTGGTGATTCCAGAGATCAGCATGCGTTTGGGTCCAGGCAAACACTACATCACAAAGACGTTTCCGGTCCCATATGAGCTGGAGATGTTTAACGAGATATTGACCAAGCATGTTCGTGAATTGGCAGCACCAGATCAATCCCTACTGGAGAGTGCGACTTCAACGTTTAACAATATGAAGATGATGTTTAACTTGATGGCCTCTACAAGCGAAAGTCTGTTCAAGAACCAGGAGCTTATAGAGTTTCTGAGAGCGCAAAACTTTGATGCTGTTTTAACCGATCCTGCCCTACCAATGGGGGCCATATTGGCATATAATCTTTCCGTACCTGCGGTGTACATGTTAAGGGGAATACCATGTGGCATTGATGCTGCAGCCACAGCCTGTCCAGACCCTCTTTCATATGTCCCACGTTTCTTTACAAAAAACTCAGACCGGATGTCTTTTGGTCAGCGTGTGTGGAACGTTCTTGTGAGCATGCTGGAACCACTGGTGTGTAAGGTTTTTTATTTGTCCTATGAGGATGTGGCATACAACTTCCTGCAGAGAGATGTGAGTCTGATTGAGATCCTGAGCACTGCAGCTGTCTGGTTGATGCGGTATGATTTTAGCCTGGAGTTCCCCAAACCCCTGATGCCCAACATGCAGCTCATAGGAGGAATTAACTGTGAAATTAAGAACCCACTGACGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_05864099_05864974.mRNA True 876 mRNA 0.47 1 5864099 5864974

Neighbor

gene id symbol gene type direction distance location
CI01000306_05857348_05858295 UGT1B7 coding upstream 4685 5857348 ~ 5859414 (+)
CI01000306_05848803_05855772 NA coding upstream 8226 5848803 ~ 5855873 (+)
CI01000306_05835418_05846769 PPEF1 coding upstream 17140 5835418 ~ 5846959 (+)
CI01000306_05826877_05830536 RS1, RS1A coding upstream 33030 5826081 ~ 5831069 (+)
CI01000306_05805669_05822854 CDKL5 coding upstream 40691 5805669 ~ 5823408 (+)
CI01000306_05870047_05877183 UGT1B1 coding downstream 4364 5869338 ~ 5877194 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 coding downstream 110848 5975822 ~ 5986288 (+)
CI01000306_06051975_06053165 TMEM246 coding downstream 186464 6051438 ~ 6054765 (+)
CI01000306_06055478_06066083 NA coding downstream 190504 6055478 ~ 6066413 (+)
CI01000306_06074861_06096200 TTBK1, TTBK1A coding downstream 209887 6074861 ~ 6096287 (+)
CI01000306_05755968_05757253 NA non-coding upstream 95033 5755779 ~ 5757390 (+)
G432947 NA non-coding upstream 190804 5664915 ~ 5673295 (+)
G433070 NA non-coding upstream 290026 5573601 ~ 5574073 (+)
G433066 NA non-coding upstream 298861 5565027 ~ 5565238 (+)
G433065 NA non-coding upstream 300427 5563418 ~ 5563672 (+)
G432991 NA non-coding downstream 20226 5885200 ~ 5887156 (+)
G433120 NA non-coding downstream 25987 5890961 ~ 5891184 (+)
G432961 NA non-coding downstream 26886 5891860 ~ 5892292 (+)
G433123 NA non-coding downstream 42313 5907287 ~ 5909232 (+)
G433134 NA non-coding downstream 57251 5922225 ~ 5972106 (+)
G432958 NA other upstream 203930 5658928 ~ 5660169 (+)
G432678 NA other upstream 1341563 4522182 ~ 4522536 (+)
G432583 NA other upstream 1536277 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 2055101 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 2081080 3778052 ~ 3783019 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 241169 6106143 ~ 6108175 (+)
G433724 NA other downstream 243637 6108611 ~ 6129778 (+)
G434545 NA other downstream 1254343 7119317 ~ 7119859 (+)
CI01000306_09225597_09230504 NA other downstream 3360591 9225512 ~ 9231333 (+)

Expression


Co-expression Network