CI01000306_05891607_05897232 (PECR)


Basic Information

Item Value
gene id CI01000306_05891607_05897232
gene name PECR
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5891573 ~ 5897325 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_05891607_05897232.mRNA
ACAGGAAGCTAGATCAGCACACCCGGAAGGTGACTTTTATTTTAAAACATTTCTAAAGACTCTTGCTTCACAGTCCGTCTCGACAGCGATATCATGGCTGTGTCCAGTGTTTTTAAAGTAGGTCTTTTCAATCACAAAGTTGCAATCGTGACGGGAGGCGGGACTGGGATAGGAAAAGCTATTACTTCTGAACTCTTACAGTTGGGATGCAATGTGGTCATATCATCCAGAAAGCTTGAGCGTCTGGAGTCAGCAGCTGAAGAGCTGACACAGAAAATCCCCCCATCCAGCCCGGCTAAAGTGACCCCTATACAGTGCAACATCCGGAATGAAGAAGAGGTGAAGAACCTGATGGCCTCCACCCTGAAGCTCCATGGGAGGATCGACTTTTTAGTGAATAATGGAGGTGGGCAGTTTTCCAGCCCAGCGAACATGATGAGTGTAAAAGGCTGGAATGCTGTGATTGACACCAACCTCAACGGAACGTTCTTATGCTGCAAAGAAGCATTCAATGCATGGATGAAAGATAATGGAGGTGTGATTGTGAACATCATTGCGGACATGTGGAAGGGTTTCCCTGGAATGGCACTTTTTTATGGCAGGCACACAGGAGCGGCCAGAGCTGCCGTGGACAACCTGACCAAGAGCCTGGCCATTGAGTGGGCTGATAGTGGGGTCCGGGTCAACTCTGTGGCGCCGGGAACTATCATATCCAAAACTGCAATGGAAAACTACAAAGAACATGGTCCTACTATGTTTAAGATGTCAGTGCCATTTAGTCCGGCTAAAAGACTTGGAATTCCTGAGGAGCTACATTACTGGAGCAACCTTGAAGGTCGACGCAGGACAGAGCCTGTACCACTCTGTGTGGCAAATCCCAGATCACAGTTCCTGGCCTGCAGCCCCCGAGGGAGAAAACACAGACACATTGAGAGAAATCATGAACATGACCAAATCCAAGCTGTGAATCATAACAAAACAAGTCTGACTGTCAAACAGCTGCTCTTTATCATAGCGTGGAAATATGTCACCATCCTTGAGGATTATGTTGACTTTTGTTAATTAAAGGGATCTTACAAAGTAAGACAGCAATAAA

Function

symbol description
pecr Predicted to enable trans-2-enoyl-CoA reductase (NADPH) activity. Predicted to be involved in phytol metabolic process. Predicted to be active in peroxisome. Orthologous to human PECR (peroxisomal trans-2-enoyl-CoA reductase).

GO:

id name namespace
GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity molecular_function

KEGG:

id description
K07753 PECR; peroxisomal trans-2-enoyl-CoA reductase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_05891607_05897232.mRNA True 1096 mRNA 0.47 9 5891573 5897325

Neighbor

gene id symbol gene type direction distance location
CI01000306_05888356_05890267 TMEM169A coding downstream 1207 5888069 ~ 5890366 (-)
CI01000306_05879886_05883498 NA coding downstream 7341 5878738 ~ 5884232 (-)
CI01000306_05760131_05782175 SCML2 coding downstream 109398 5759334 ~ 5782175 (-)
CI01000306_05732360_05733779 NA coding downstream 155725 5731283 ~ 5735848 (-)
CI01000306_05664945_05673274 ACE2 coding downstream 218275 5664945 ~ 5673298 (-)
CI01000306_05902120_05929983 MAP4K3A coding upstream 4473 5901798 ~ 5929983 (-)
CI01000306_05990444_06033972 NCX, SLC8A1, SLC8A1A, SLC8A1B coding upstream 91928 5989253 ~ 6033972 (-)
CI01000306_06048083_06049632 NA coding upstream 150514 6047839 ~ 6049632 (-)
CI01000306_06108667_06110250 NA coding upstream 210933 6108258 ~ 6110250 (-)
CI01000306_06244021_06244397 NA coding upstream 346610 6243935 ~ 6244397 (-)
G433628 NA non-coding downstream 4441 5885203 ~ 5887132 (-)
G433656 NA non-coding downstream 39174 5849758 ~ 5852399 (-)
G433595 NA non-coding downstream 75704 5758198 ~ 5815869 (-)
G433633 NA non-coding upstream 114334 6011659 ~ 6028057 (-)
G433940 NA non-coding upstream 154480 6051805 ~ 6054634 (-)
G433939 NA non-coding upstream 206514 6103839 ~ 6107564 (-)
G433948 NA non-coding upstream 241352 6138677 ~ 6139696 (-)
G434001 NA non-coding upstream 359680 6257005 ~ 6257347 (-)
G433450 NA other downstream 507810 5361643 ~ 5383763 (-)
CI01000306_04544349_04545034 NA other downstream 1346481 4542723 ~ 4545244 (-)
G432022 NA other downstream 2887682 3000236 ~ 3003891 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other downstream 4142623 1717933 ~ 1726043 (-)
G431814 NA other downstream 4579139 1311702 ~ 1312434 (-)
G433670 NA other upstream 143689 6041014 ~ 6041283 (-)
G433985 NA other upstream 298782 6196107 ~ 6197210 (-)
G434016 NA other upstream 457855 6355180 ~ 6361643 (-)
G434086 NA other upstream 540081 6437406 ~ 6452251 (-)
G434338 NA other upstream 969331 6866656 ~ 6866936 (-)

Expression


Co-expression Network