CI01000306_06048083_06049632


Basic Information

Item Value
gene id CI01000306_06048083_06049632
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 6047839 ~ 6049632 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_06048083_06049632.mRNA
ATGGCATCCAATACAGGACAAATGGGTTACCTGCCCAGCGGAGGGGCCATTTTCTGCACCATACCCGACATCTTCTACCTACCTGAGCTTGTCTTTGGCGGACTGGTATTGTGTCTGGTAGCATCTACATACCTCGATCCTCCCAATCCCCAGGCATATGTGATTTCTGTGACAATTTTCTGTTTCATCATGTCATTCCTCTGGTTGATGGTCTTTGCCTGTGGATCTCATCGTAACAAAAGCTCTTGGGCAAGCGCGGATGTAGCATACCATGCATTTGCAGCACTCCTCTATCTCAGCGCTTCTGTGCTTCTAGCTTTTATAACCATTTTTATTGGTGACGCAAATTTGAAAGAGACAATTCTTTACAAGCTGGATGTAGCTGCTGTGGTGTTTTCCTTTCTCACCACTCTACTGTATGTCATCCACACCATTTTCTCAGCCCTCCGATGGAAATCCTTCTAAAACATCTGCACACAACCTGCTTTACTCATATGATTGTTGAAATGTCTCATTAAGCAAAGTTATTACACAAATGTCATTTAGTGCATCAGTAATAATTCATGTGATAATGGATTGACTGTCCAGTCTTATTGTGTTATTCTATAACTATACAGACTATTTTTTTAAAAACACTTTTTGCTGGTATTTTTTTGTAAACTAGTCTATGTATAAATTATTGTAATTACTGAATGACTTAACTAATAAA

Function

NR:

description
Myelin and lymphocyte protein

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_06048083_06049632.mRNA True 709 mRNA 0.39 4 6047839 6049632

Neighbor

gene id symbol gene type direction distance location
CI01000306_05990444_06033972 NCX, SLC8A1, SLC8A1A, SLC8A1B coding downstream 13867 5989253 ~ 6033972 (-)
CI01000306_05902120_05929983 MAP4K3A coding downstream 117856 5901798 ~ 5929983 (-)
CI01000306_05891607_05897232 PECR coding downstream 150514 5891573 ~ 5897325 (-)
CI01000306_05888356_05890267 TMEM169A coding downstream 157473 5888069 ~ 5890366 (-)
CI01000306_05879886_05883498 NA coding downstream 163607 5878738 ~ 5884232 (-)
CI01000306_06108667_06110250 NA coding upstream 58626 6108258 ~ 6110250 (-)
CI01000306_06244021_06244397 NA coding upstream 194303 6243935 ~ 6244397 (-)
CI01000306_06253870_06254391 NA coding upstream 203714 6253346 ~ 6256066 (-)
CI01000306_06273326_06277287 NACC1 coding upstream 222783 6272415 ~ 6277442 (-)
CI01000306_06289571_06299875 MAN2B1 coding upstream 239516 6289148 ~ 6300251 (-)
G433633 NA non-coding downstream 19782 6011659 ~ 6028057 (-)
G433628 NA non-coding downstream 160707 5885203 ~ 5887132 (-)
G433656 NA non-coding downstream 195440 5849758 ~ 5852399 (-)
G433595 NA non-coding downstream 231970 5758198 ~ 5815869 (-)
G433940 NA non-coding upstream 2173 6051805 ~ 6054634 (-)
G433939 NA non-coding upstream 54207 6103839 ~ 6107564 (-)
G433948 NA non-coding upstream 89045 6138677 ~ 6139696 (-)
G434001 NA non-coding upstream 207373 6257005 ~ 6257347 (-)
CI01000306_06336883_06339725 NA non-coding upstream 289347 6336651 ~ 6341662 (-)
G433670 NA other downstream 6556 6041014 ~ 6041283 (-)
G433450 NA other downstream 664076 5361643 ~ 5383763 (-)
CI01000306_04544349_04545034 NA other downstream 1502747 4542723 ~ 4545244 (-)
G432022 NA other downstream 3043948 3000236 ~ 3003891 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other downstream 4298889 1717933 ~ 1726043 (-)
G433985 NA other upstream 146475 6196107 ~ 6197210 (-)
G434016 NA other upstream 305548 6355180 ~ 6361643 (-)
G434086 NA other upstream 387774 6437406 ~ 6452251 (-)
G434338 NA other upstream 817024 6866656 ~ 6866936 (-)
G436446 NA other upstream 3606647 9656279 ~ 9671776 (-)

Expression


Co-expression Network