CI01000306_06437636_06441233


Basic Information

Item Value
gene id CI01000306_06437636_06441233
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 6436626 ~ 6441267 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_06437636_06441233.mRNA
GTATATAAACATAGCAGCAAGGAAGCAGAGTATCATTTCAGTTTTATCTCACAGTGCAAAGCTAATCTTTATTGCTCCCATGAGAATAAAATAAACTGGGTGATGGAAGTAGCTTTGCATACTTATGCTAAACGATTAGGATACAAACAAGATTTGGACTTTGCTTTATGATATGAAATCAATGAGTAAAGAAACACAGAGTGATATAGCATTTATGGACACATTGTAGAGATTTTTATTTGAAGGAAACCAAGCAGCAAATACAGAACAGTTTCATAAAGATCGAAAGGTGTAAGGTCTATAATTAAGTCTTTTTCCATTAAAAAGCAGTTCTGGTAGTTTTCTTATGTTTACTCTTTTTATTATTATTAATTTAGTTAATTTATTTTTAAATCAAAGTTAAATTGCTTTTCATTAAACCTTTTTTTTTTCATTTTTATGTTCCTAAATGATTTTAAAATAGACTTTTCTTCCTTTTTCTTTATTTACCACTTTGAATTGCCATTATGCATGAAATGTAATATATACATTTGGATAAAATATAAACTATTTGCTCGCTTGTTCGCTTTCTGTTATGAATATCGGGAGTTTATTTATACGTTTTGTTTGTTTGTTTGTTTGTTTCAAACGCAAATGCAGTATTTCTACTCATTAAATATTTTTTTGTTAATTTTCATTCTGCCCACACAAAGTTGTGAGAAGCACATGGGGATCCTGCCCACAGTGTTGTCTATCCTGTCTCTAGTGCGCATGCGCACATGGTTGACGTGCGCTGAGCGCTGAAGAAAAGGAACAGCCGGCGCCATGCGCTTCCATCAAACTCACGGCTCGCGCTGAGACTTCACAAGTGTCAAACCATAGATGTCGCGGGAATGTGAGAGAGTCACGTTGCCCTCGGTCAAATGGAATGAAATCGGCAGCGGGGGGCCAGGTTACAGCGTTTCTTTCAATTTCGCTTGTGGATACATGTAGTGAAGTTGCAGGCTGATACTGTAATACAGCGCTGAAACATGGAAGGAAACTCAAGGGAAAGCGACCGTCTGGAGCGAGAGCGCCAGTACTGCGAGCTGTGCGGGAAAATGGAGAACCTGATGAAGTGCGGACGGTGTCGCAGCTCGTTCTACTGCAGCAAAGAGCACCAGAGACAGGACTGGAAGAAGCACAAGCGGAGTAACTCTTCTGTTACGTCACCCGGCGAAAGAATGCCAGATTTTATCAAGTCCGCTACGGGCCCTGACACCAAACCGACCGCTGACAGCTCGAAACCCAACGGACAGACGCGGTCGCCTCCTCAGAAACTGGCCACGGACTATATCGTGCCCTGCATGAACAAGCACGGCATCTGTGTGGTCGACAACTTCCTAGGTGACGAGATCGGACGCAGTATTCTGGAGGACGTGCGGGCGCTTTACTTGACCGGCGGCTTTACAGACGGACAGCTGGTCAGTCAGAGGAGCGACTCGTCTAAGGACATTCGGGGGGATAAGATCACCTGGGTGGAGGGAAAGGAGCCGGGATGCGAAAGGATAGCGTTTCTCATGAGTCGCATGGACGATCTGATCCGACACTGTAACGGGAAACTGGGCAACTACAGGATCAATGGAAGAACAAAAACGGGAAGACGCGTCACCTTTGACCCTCAGGTGATGCCTATATCCGCACCTGCCTTTCAATAGAAAGTGAATCTTAAGAAATTATTCAGACGCTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_06437636_06441233.mRNA True 1710 mRNA 0.43 3 6436626 6441267

Neighbor

gene id symbol gene type direction distance location
CI01000306_06426490_06435408 NA coding upstream 1068 6423775 ~ 6435558 (+)
CI01000306_06355528_06390936 SIPA1L2 coding upstream 45437 6354708 ~ 6391189 (+)
CI01000306_06303064_06327102 NA coding upstream 109149 6302557 ~ 6327477 (+)
CI01000306_06281314_06288766 TRMT1 coding upstream 147573 6281014 ~ 6289053 (+)
CI01000306_06258779_06262616 STX10 coding upstream 172323 6257089 ~ 6264303 (+)
CI01000306_06463911_06469485 NA coding downstream 21946 6463213 ~ 6469917 (+)
CI01000306_06479829_06485192 NA coding downstream 38562 6479829 ~ 6485192 (+)
CI01000306_06523680_06551842 NA coding downstream 81823 6523090 ~ 6552089 (+)
CI01000306_06564978_06573507 NA coding downstream 123711 6564978 ~ 6573791 (+)
CI01000306_06592383_06685440 DIAPH3 coding downstream 151116 6592383 ~ 6685440 (+)
G433765 NA non-coding upstream 6482 6429944 ~ 6430144 (+)
G433753 NA non-coding upstream 25068 6411156 ~ 6411558 (+)
G433715 NA non-coding upstream 159478 6275371 ~ 6277148 (+)
G433709 NA non-coding upstream 166088 6269358 ~ 6270538 (+)
G433706 NA non-coding downstream 19939 6461206 ~ 6462044 (+)
G433710 NA non-coding downstream 49182 6490449 ~ 6490831 (+)
G433796 NA non-coding downstream 156698 6597965 ~ 6598562 (+)
G433915 NA non-coding downstream 341818 6783085 ~ 6783358 (+)
G433913 NA non-coding downstream 376101 6817368 ~ 6817870 (+)
G433724 NA other upstream 306848 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 328451 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 450338 5975822 ~ 5986288 (+)
G432958 NA other upstream 776457 5658928 ~ 5660169 (+)
G432678 NA other upstream 1914090 4522182 ~ 4522536 (+)
G434545 NA other downstream 678050 7119317 ~ 7119859 (+)
CI01000306_09225597_09230504 NA other downstream 2784298 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 2832632 9263589 ~ 9289035 (+)
G435590 NA other downstream 3271582 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 3418946 9860480 ~ 9865724 (+)

Expression


Co-expression Network