CI01000306_06780961_06789374


Basic Information

Item Value
gene id CI01000306_06780961_06789374
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 6780773 ~ 6789594 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_06780961_06789374.mRNA
ACTCCTTAACTCACTCTACAAGCTTCCAGACAACTCAGAGACCATCTTAAAAATGCCAAGCCCCTCCTACTTGGACTAAACCATTTAGAAATGAAAGGTAATAAAGAAATTTAAGAAAGACAAATAAATGTGATTTAACAGTAACAAATTAAACTGTTATAATATTACAAAAATACATAAACATTTGGAACAAAACAAATTCAATCATTAATGTTTAACAATGCTCAATCAGATCACCAATCTCCCCCTAACACATGAGAACAATGTGCCTTCTATTGGCGGGACTGAGATCTTCAAAATTGTGGCATTTACTGTGACCGGGTTTTGTCTGTTTGGGATGGAAAAATGTTCCAGACCTCGTTGGTTGGTGGTGGTGTGCCCTGTCTGTCATGCTGGCAGCACGTGGTGGCACTCTGGCCTGGTTCCATCACATGCGCTCCGGGCATTGTCCTTCATGCACATCATCACAGACTCACTCATGTTGAGCCTCCAATGGATTCAGCTGCCCCTTACAGTAAGGCCGAATGGACAGAAGTGCCATTTCAAGGTGAAAAACCCTTTTGGAGTCAAGCAAGGAGATTGTGGAAAAAAGAAAAAGAGTGAGAAGGAACAGGAGAAGTTGGACAGTCTGTGTTCGTCTTGGTTGCTACAGTTAGAGAACAGCCAGACCTTCACATTGTTATTGAGGACCGTCTGTCAAGTAGATTCACATCCAACAGTCGAGACAGTGGAGAGAATAAAAAACAGAAACAGTCATTGTAAAAAGCAAACATACATTTTGGGAAAAAGGACAAAAGACACAGTCTCTGCCGCTACTCGGCAGAATTTCATATCCTCTGCCTTTCCAGCTTGTCCTATTAGGATGAGAAAAAGGCAATGGGAATGGGTGATTTCTTGTGTTCCTGTCTTTTTGGAGCAGGGCGAGAACAGACGAGCAAGAGAGAAAGAGGCAGTTCATAAAAAAATAAGGAGGCAGAGAGCAAAGAACATGGGACACAGAAGCACAGAACATCCTCTCTCGGGGTTACGCTCGCGGCGGCAGTGGATCATTTAGAGGAGATGGTGAGAGTGAGCGCCTGTCTGATGCTACTACAGAGGGGAACAAGGAAGGCTGTTCTTCATTAGCATTGCTTTTGCAGGAGCAGTCCGTAGTGCTGAACGGAGCTGTGATCCCACTAAGGGCAGCACTACTCACACCACCCGCAGAGAGGCTGACGTTTCAGAAGACTAAACGCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_06780961_06789374.mRNA True 1242 mRNA 0.44 5 6780773 6789594

Neighbor

gene id symbol gene type direction distance location
CI01000306_06776313_06778496 NA coding downstream 2077 6776114 ~ 6778815 (-)
CI01000306_06741870_06743844 NA coding downstream 36831 6741859 ~ 6743942 (-)
CI01000306_06414819_06416263 NA coding downstream 364091 6414541 ~ 6416682 (-)
CI01000306_06336883_06339725 NA coding downstream 440795 6336651 ~ 6341662 (-)
CI01000306_06289571_06299875 MAN2B1 coding downstream 480522 6289148 ~ 6300251 (-)
CI01000306_06815523_06829337 NA coding upstream 25847 6815441 ~ 6829516 (-)
CI01000306_06998286_07073243 PCDH17 coding upstream 208692 6998286 ~ 7073243 (-)
CI01000306_07331303_07340271 NA coding upstream 541358 7330952 ~ 7341271 (-)
CI01000306_07561305_07566290 LIMS1 coding upstream 770957 7560551 ~ 7566933 (-)
CI01000306_07680537_07684881 NXPH2B coding upstream 890274 7679868 ~ 7685987 (-)
G434098 NA non-coding downstream 306240 6467705 ~ 6474533 (-)
G434097 NA non-coding downstream 313832 6466456 ~ 6466941 (-)
G434086 NA non-coding downstream 339320 6437406 ~ 6452251 (-)
G434079 NA non-coding downstream 354817 6425710 ~ 6425956 (-)
G434325 NA non-coding upstream 59884 6849478 ~ 6850138 (-)
G434343 NA non-coding upstream 80215 6869809 ~ 6870026 (-)
G434485 NA non-coding upstream 176168 6965762 ~ 6965987 (-)
G434487 NA non-coding upstream 178851 6968445 ~ 6968662 (-)
G434506 NA non-coding upstream 290530 7080124 ~ 7080333 (-)
G434016 NA other downstream 419130 6355180 ~ 6361643 (-)
G433985 NA other downstream 583563 6196107 ~ 6197210 (-)
G433670 NA other downstream 739490 6041014 ~ 6041283 (-)
G433450 NA other downstream 1397010 5361643 ~ 5383763 (-)
G434338 NA other upstream 77062 6866656 ~ 6866936 (-)
G436446 NA other upstream 2866685 9656279 ~ 9671776 (-)
G436626 NA other upstream 3045431 9835025 ~ 9836323 (-)
G436643 NA other upstream 3232554 10022148 ~ 10025375 (-)

Expression


Co-expression Network