CI01000306_06815523_06829337


Basic Information

Item Value
gene id CI01000306_06815523_06829337
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 6815441 ~ 6829516 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_06815523_06829337.mRNA
AGATACAGGTGTGTCTTGCATGTTAAAAAGACAGCTTTGTGTGTCCTGCATCTTAAAAAGACCTATGCGCTCTATCAAAAGTCTTCTTTCAGGCTGGCCGGCATTGATAACGATACCTAGCTTTCATCAAGAGGACCCGGCAGCACAATATTAAGTTTGAACTGGATTAAAGTACAAGAATGACTATAGCAGGTTATAAGCAGAGTTTTAAGCAGGGCTGCCTGCATGGACACCTTGACCTACATAAGGGTGAAACAAGTAGACATGCAACCCAAGGTGATCAGGTTTACTTTTCTGATTTGTTATACTACAGCTTCAGGGGTTTGGTGACTTTGAGTTACTGCACAGACAGTGCTGTGGTGAACTGTTCAAACAGGTCACTAGAGCATCTATTCTACCTGAGGCCATACAGAGAACAAGAGAAAGAGAGAGGACAAGAGAGCAGAGGGAGAAAATGTAAAGCAAAAATGACCCAAAACGTTTCTAATTATGAGCTGGTTCCTGCCGGTGTTCCGGCTGCCAGGGAGTCAGCTGGGTTCACTGATCCCTCAACGTGTACAGCTGTTATCTTTGACTTGTGTCCAAAACCCAGATTGGAAGGGCGACCGCTTCTCTGGAGTGAGAGTATCCACACTTAAAGGTCGTTAGCATAACCTCTGGCACCTCACAAAAGAAAGACAGATGAGAAAAAGTGAGTCAATTATTCATAGAATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_06815523_06829337.mRNA True 720 mRNA 0.44 5 6815441 6829516

Neighbor

gene id symbol gene type direction distance location
CI01000306_06780961_06789374 NA coding downstream 25847 6780773 ~ 6789594 (-)
CI01000306_06776313_06778496 NA coding downstream 36745 6776114 ~ 6778815 (-)
CI01000306_06741870_06743844 NA coding downstream 71499 6741859 ~ 6743942 (-)
CI01000306_06414819_06416263 NA coding downstream 398759 6414541 ~ 6416682 (-)
CI01000306_06336883_06339725 NA coding downstream 475463 6336651 ~ 6341662 (-)
CI01000306_06998286_07073243 PCDH17 coding upstream 168770 6998286 ~ 7073243 (-)
CI01000306_07331303_07340271 NA coding upstream 501436 7330952 ~ 7341271 (-)
CI01000306_07561305_07566290 LIMS1 coding upstream 731035 7560551 ~ 7566933 (-)
CI01000306_07680537_07684881 NXPH2B coding upstream 850352 7679868 ~ 7685987 (-)
CI01000306_07687805_07693178 NA coding upstream 858090 7687606 ~ 7693178 (-)
G434273 NA non-coding downstream 32490 6782669 ~ 6782951 (-)
G434098 NA non-coding downstream 340908 6467705 ~ 6474533 (-)
G434097 NA non-coding downstream 348500 6466456 ~ 6466941 (-)
G434086 NA non-coding downstream 373988 6437406 ~ 6452251 (-)
G434325 NA non-coding upstream 19962 6849478 ~ 6850138 (-)
G434343 NA non-coding upstream 40293 6869809 ~ 6870026 (-)
G434485 NA non-coding upstream 136246 6965762 ~ 6965987 (-)
G434487 NA non-coding upstream 138929 6968445 ~ 6968662 (-)
G434506 NA non-coding upstream 250608 7080124 ~ 7080333 (-)
G434016 NA other downstream 453798 6355180 ~ 6361643 (-)
G433985 NA other downstream 618231 6196107 ~ 6197210 (-)
G433670 NA other downstream 774158 6041014 ~ 6041283 (-)
G433450 NA other downstream 1431678 5361643 ~ 5383763 (-)
G434338 NA other upstream 37140 6866656 ~ 6866936 (-)
G436446 NA other upstream 2826763 9656279 ~ 9671776 (-)
G436626 NA other upstream 3005509 9835025 ~ 9836323 (-)
G436643 NA other upstream 3192632 10022148 ~ 10025375 (-)

Expression


Co-expression Network