CI01000306_07331303_07340271


Basic Information

Item Value
gene id CI01000306_07331303_07340271
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 7330952 ~ 7341271 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_07331303_07340271.mRNA
ATATATCAATGATTCATGTAACATGGCTCCAGCACATTCAGAAACTGCTTTTTTCACTCCTAATTGAGGGCGAAATTCAAAACAGGTATTTTTGACCCAGCGTGACACGACTGGACTTGTTCGCACTGAAACAAATAAGGAAAATAGTGCATGGTTGACTGACTTCTCAGCTAACAGGGAATGTTTTCATAACTTTGGCTAACATTCTGGTAAAGTTCTCTTAAAGATATTACAAAAATTCTTCCAGTAATGTTAATAACATTTTTCGTTCAAAGTTATTTGGTCTTTATTAATGTTCTCAAAACGTTAGCACAAAAATGTTAGTTATACATCGTTCATGGATCGTTTTATTTCTGAAAACGTTTTAGTCGGATGTTCGTCTAATGTTTATTAAACATTACTGCTTGTTTTAGAATGTTCAGAGAACATTTTAGTTACATTTAAGTTACATTCCCATAATATTCGCAAAATCTTGAAATGGAATGATCCCTGAAATGAAAGTTTAAAAGACTAAACGGTCTGAACATTCAGAGTACCTTCAGAAACAACGTTTTCATAATTTAATGGGAACATCAATGAAATGTTCTTAGAACATATTTTTGTTAGCTGGGCTGTAGAAGATGTGATATTGTTGCTGATTTTAAAGGAATAATTCATGTCATCTTGTATGCACCTTCATGTCATTCCAAACCTGTAAGATTTATTTATTCTGTAGAATACAAAACAAGGAGATTTGATAAATGTTCACACTGTTCTTCTCCATATAGTGCAAGAAAACAGACTAGTGGCTGTTAGTTAGGACAAATAAGCATCATAAAAGTGCGTTGATTTGGACAAATATGTCTGCTAAATGAAGTAATGCAAATGTAAATATGACTCAAATGCTTTTTTACTGATATTCTGTAGCCATGCGATAGCTCTGTGTGGGTAACGGATTAAAATGAATGTCATTAATCACTGACAACTGCACTTCTGCATATTCAAACAGGTTGCAAGACACATGAGAACCAGCAGCCTTTGGTGTCACCAGGAATATGAAAATGATATTGGAGAGATAAGGCATTCCATCTTAAACTCGTCTACATTTTTCCTCATCGAGCGAGGATTGACAGCCACACTTCACATAGCCCGAGGATGGAGTTTGTCAGATGGAGGACTGTCGTGCCAAGTGAGGGTAAAGGCTCCAAAGTGGAGGAGGCAATCGGAAGTTCACGTTCAGATAAAACCATCAATATCCTCCTCTGCATTACCTGTCTACCAAACACTGCAGAGGAGGCGAGAGAGGAAGACAGAAAGAGAGCAGCCACTTCATTATAGAGAAAAGATCATTGGTCAGAGCAAAGATCATCGACCCGAGCAAAGATTGGCTGGAACGGTGCGGTCCGCTGGGGAAAGACCCATGAGGCAGGAGCCGAATAATGGATGGATGATGAGGTGATGAAGAGAGGAACGGATTGATGGATCGCACACGAATGGATGCGTGTACTGAAAGCGTACGTGTGTTTTAATGCATGGCTGGTCACTTGAGTCCCACAAGACAGTGTTAAAAATGCACACCATCCCACACCTCTCTCTTTTTTCTCTCCGTTTCACTCTCTTTCGCCCTTTTATGCATCCAGACCCAGTGGCAGAGCAATGAAAGGCCGGTTTGACCTCGTCTCACCTCTCACAAAGCAGCCTGAACCCCGCTCACAATATCTGACCTTGGGAAAGTGCCGTCTCTCCGCATAGCAAACAGACCTCTGCCTCCCTGGTGAACAGACTGATTTCATTTCTCACAATTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_07331303_07340271.mRNA True 1789 mRNA 0.40 4 7330952 7341271

Neighbor

gene id symbol gene type direction distance location
CI01000306_06998286_07073243 PCDH17 coding downstream 257709 6998286 ~ 7073243 (-)
CI01000306_06815523_06829337 NA coding downstream 501436 6815441 ~ 6829516 (-)
CI01000306_06780961_06789374 NA coding downstream 541358 6780773 ~ 6789594 (-)
CI01000306_06776313_06778496 NA coding downstream 552256 6776114 ~ 6778815 (-)
CI01000306_06741870_06743844 NA coding downstream 587010 6741859 ~ 6743942 (-)
CI01000306_07561305_07566290 LIMS1 coding upstream 219280 7560551 ~ 7566933 (-)
CI01000306_07680537_07684881 NXPH2B coding upstream 338597 7679868 ~ 7685987 (-)
CI01000306_07687805_07693178 NA coding upstream 346335 7687606 ~ 7693178 (-)
CI01000306_07694770_07711329 PHKA2 coding upstream 353421 7694692 ~ 7712134 (-)
CI01000306_07716780_07727777 COL6A2 coding upstream 375479 7716750 ~ 7727854 (-)
G434747 NA non-coding downstream 19907 7310814 ~ 7311045 (-)
G434716 NA non-coding downstream 51672 7279016 ~ 7279280 (-)
G434690 NA non-coding downstream 64699 7265914 ~ 7266253 (-)
G434673 NA non-coding downstream 72517 7258095 ~ 7258435 (-)
G434686 NA non-coding downstream 74685 7255968 ~ 7256267 (-)
G434852 NA non-coding upstream 87296 7428567 ~ 7429273 (-)
G435961 NA non-coding upstream 193676 7534947 ~ 7536986 (-)
G435967 NA non-coding upstream 202103 7543374 ~ 7543611 (-)
G436032 NA non-coding upstream 533494 7874765 ~ 7875618 (-)
G435922 NA non-coding upstream 657739 7999010 ~ 8002976 (-)
G434338 NA other downstream 464016 6866656 ~ 6866936 (-)
G434086 NA other downstream 878701 6437406 ~ 6452251 (-)
G434016 NA other downstream 969309 6355180 ~ 6361643 (-)
G433985 NA other downstream 1133742 6196107 ~ 6197210 (-)
G433670 NA other downstream 1289669 6041014 ~ 6041283 (-)
G436446 NA other upstream 2315008 9656279 ~ 9671776 (-)
G436626 NA other upstream 2493754 9835025 ~ 9836323 (-)
G436643 NA other upstream 2680877 10022148 ~ 10025375 (-)

Expression


Co-expression Network