CI01000306_07687805_07693178


Basic Information

Item Value
gene id CI01000306_07687805_07693178
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 7687606 ~ 7693178 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_07687805_07693178.mRNA
ATGGACATGGACTATCGACATTTCGAGAGAGAGGCATGCTACTACTACCTCACTAATTTTCCTCAAAGACAAGAGTCAGGATGCTACAGTGAGGTAGAAATCACCCTAACCAGTCTGAAACTATTACCTAGAAGAGGTTTAATATTAGTGAATATCTTGGGTCTCAGTGAGGTCACTATCAAATCTGTCTCTATGAAACTGCGACGCAAATCAGTCCAGAGAGCTCGACAGCAACAGCAAGAACATGTGAAGGTCTCCAAGAGCATCTCTGTGGTGTTGAGTGACACTGACTCTAGCCAGTCAGACAGTGTTGAGGAAATAAAAGACCATGCGTCTGTTATTCCTGATATGAAGCATCCAATAAAGAAGAGTAGAGCTGGTGCATCATGCCGATTGAGTAAAGATGACTCTATGACACTGCGGGGTAAAACGGTCCAGAGAGGTCGACAGCAACAGGGAGAACATAAGATCTCCGAAAACATCTCTGTGGTGTTGAGTGACACTGACTCTAGCCAATCAGACAGTGTTGAAGAAATAAAAGACCATGTGTCTGTTATTCATGATATGATGCGTCCAATAAAGAAGAGTAGAACTGGTGCATCATGCCAATTCAGTAAAGAAGATGAGAGGCCGCTTTCCATTGTGGAACCACAACATGTAACGGTTCAGAAGATCTCCCTGGCTCCAGGTGCAGTGGCTGAGGACACTCTAGGTAAACTCAGGTTGATGGCTAACACCTCTGACTCGGAGCCGAGACCTAGAAGCCCTGTTGAGTCTCGAGGAGAGTCTGTATTGGACGAATCCAGTACTGATCTCATGGTGGAATCGGGTCCCAGCTCGCCCTGTGGTCCTGTTGTTACCGTAAGATGCAAAGAATGCGAGAGTCTTTTCGCCAAGATGAGAAGACGGCCAACCCCCAAAAAGAAAAGCAGAGATAGGAATCCAGCATCTTTATCTTGTGATGAGTGGATTCTGCTTAAGAAGTGGCACCCTCAGAGACACCGTCATCGGGAGAAGGGATTATTGTGGGCAAGCCTGACTCGCATCAGGAAGCTGTCAGCAAAAGGCTCCAATTCTGCAGCAATCAACAGAAATCAAGTGAACTGCTCCAGACCTCATGTGTTTCAGCAGAGGAGTTTGCGTCGCTGCAAGTATCTAAACTCTATTCAGACTGACCTGTCTGTTACCAAAGCAAAGCCACGGCATCGTAAGAGGCCGCGAGCTGTGGTCTGGCCACCCGTTGGAGGGTGGAACTCTGTGGTGAAAAGAAAGTCTTCTTCCATAAACGACACATTATCTCAGCAGCTTTTTCCACTCAACCTCAGTGTCAGTGTGACACAGGAGGACAGACTGCTTGTAGATGAGCAGATTTCAGGATTAAATGCAGATCTCAAGCAGAACTCAGATGCCTCCAGCAAACCGAGGAGGACTAATGTCCGGGGCAAATTGAACGAGCAGGAAGTGTCTGATGGCATAGACGGAACACGGCGGGTGCTGAAGTTTGATGACACGACTGAAACTGTTGCTGTGGAAACTGCGGAACAAAGGAAAAGCCCTGGGCAGCAGCATGAACATGGAGAGATTTGTGAAGCCCAGAAAGGTTTCCAGAATGAGCAGCAGGAAAAGTTGTCTGAGGATTCGGATGGGTTCAGGACGCCCACAGATCTCTTCAGCGTGAAGCCTAAGATTAAACGAGGGAACCAGAAGAAAGTCTCTGCCTCTGGTGATACAAAACCTGCCGTACAGAAGCCAAACTTCATGTCCATGTTAGCCACACTAGTGAAAAAACAGAACCAGATTATTAAGGAACCCTGCAAATAAGCGTCAATGGGAGTTTTGTAATTAGTTCTGTTGTTTTGTATAATTGAAGAGACATGCATTGCTGCTACATGCAAGTTTTGTTTCCTCCGTTACTTTTTTAAATTAATAGATCTGATCTCTGAAAAAAAAAATCTGCTGGTATTTATTGTATTGCTCCTTTATTTGTGTTCTAACATTGGCATTTGCATGAGTTAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_07687805_07693178.mRNA True 2020 mRNA 0.45 6 7687606 7693178

Neighbor

gene id symbol gene type direction distance location
CI01000306_07680537_07684881 NXPH2B coding downstream 1619 7679868 ~ 7685987 (-)
CI01000306_07561305_07566290 LIMS1 coding downstream 120673 7560551 ~ 7566933 (-)
CI01000306_07331303_07340271 NA coding downstream 346335 7330952 ~ 7341271 (-)
CI01000306_06998286_07073243 PCDH17 coding downstream 614363 6998286 ~ 7073243 (-)
CI01000306_06815523_06829337 NA coding downstream 858090 6815441 ~ 6829516 (-)
CI01000306_07694770_07711329 PHKA2 coding upstream 1514 7694692 ~ 7712134 (-)
CI01000306_07716780_07727777 COL6A2 coding upstream 23572 7716750 ~ 7727854 (-)
CI01000306_07745638_07782809 COL6A1 coding upstream 52431 7745609 ~ 7782809 (-)
CI01000306_07794173_07799364 TDO2B, TDO2 coding upstream 100708 7793886 ~ 7799364 (-)
CI01000306_07805018_07816100 NA coding upstream 110310 7803488 ~ 7816100 (-)
G435967 NA non-coding downstream 143995 7543374 ~ 7543611 (-)
G435961 NA non-coding downstream 150620 7534947 ~ 7536986 (-)
G434852 NA non-coding downstream 258333 7428567 ~ 7429273 (-)
G434794 NA non-coding downstream 301226 7332281 ~ 7386380 (-)
G434747 NA non-coding downstream 376561 7310814 ~ 7311045 (-)
G436032 NA non-coding upstream 181587 7874765 ~ 7875618 (-)
G435922 NA non-coding upstream 305832 7999010 ~ 8002976 (-)
G436076 NA non-coding upstream 462077 8155255 ~ 8155486 (-)
G436095 NA non-coding upstream 518276 8211454 ~ 8211949 (-)
G436096 NA non-coding upstream 519269 8212447 ~ 8212968 (-)
G434338 NA other downstream 820670 6866656 ~ 6866936 (-)
G434086 NA other downstream 1235355 6437406 ~ 6452251 (-)
G434016 NA other downstream 1325963 6355180 ~ 6361643 (-)
G433985 NA other downstream 1490396 6196107 ~ 6197210 (-)
G433670 NA other downstream 1646323 6041014 ~ 6041283 (-)
G436446 NA other upstream 1963101 9656279 ~ 9671776 (-)
G436626 NA other upstream 2141847 9835025 ~ 9836323 (-)
G436643 NA other upstream 2328970 10022148 ~ 10025375 (-)

Expression


Co-expression Network