CI01000306_07836379_07838734


Basic Information

Item Value
gene id CI01000306_07836379_07838734
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 7836345 ~ 7838939 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_07836379_07838734.mRNA
GTTCAAAAGTTTAGGAGGAAAATCCTTTCGAACAATGACGGAACAGCCTCATGGCATATTCGCTGATAAGCGCAATTATCCAGTTAAGCGAATAGTTGATAGATCCATTAAAGCTTTGCAATCAAAATTTAAAATTCTCAAGCACTCCAAGACCCTTTCATGCAAGATATCAGTCTTTTATCGCACTACAGTTGACTTTATAGCTGAAGATGATGGCAAGACGGGAGGGGAAAAAAAAGAGACTGAGTTTGGAGGAGGTGTACCCATCGAGAAAGAAGCAGTGGGCAGAAATAAAAACCAAAAGATCAAATGGAAAAGGGGACCAGAGTCTGGCCACATGGTCCTGGATTAGCAACTCCCATTGACAATGCCACTTGGGAAAGAAAAAACCGCGGACCTTCGAGAGATTACATTATGAGTTTACATATAATGCTGCCCGTTTCAAAGTACTGCAGCCTAGAGTAAATTACCCTTCATAAAAGTCAGTTCCTTCTGGTTTTAGGTGCGGTACACAACCTTTATCAATCCGGAAGTATAATGAGGTCAAACAAGATCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_07836379_07838734.mRNA True 557 mRNA 0.41 2 7836345 7838939

Neighbor

gene id symbol gene type direction distance location
CI01000306_07640049_07676915 SPOPLB, SPOPL, SPOPLA coding upstream 158561 7640049 ~ 7677784 (+)
CI01000306_07609108_07637728 NA coding upstream 198509 7609108 ~ 7637836 (+)
CI01000306_07559884_07560060 NA coding upstream 276245 7559884 ~ 7560100 (+)
CI01000306_07492176_07535995 CNTNAP5L coding upstream 299389 7490293 ~ 7536956 (+)
CI01000306_07386318_07389827 NKPD1 coding upstream 446305 7386318 ~ 7390040 (+)
CI01000306_07864325_07865368 MGC80983, FAM43A, FAM43A.L coding downstream 25153 7864092 ~ 7866319 (+)
CI01000306_08022902_08036910 ZMAT3 coding downstream 182457 8021396 ~ 8037025 (+)
CI01000306_08131828_08140454 NA coding downstream 292594 8131533 ~ 8141844 (+)
CI01000306_08178823_08206611 SLC38A3 coding downstream 339884 8178823 ~ 8207112 (+)
CI01000306_08211445_08212302 NA coding downstream 372506 8211445 ~ 8213287 (+)
G435011 NA non-coding upstream 15203 7818200 ~ 7821142 (+)
G435009 NA non-coding upstream 22508 7802261 ~ 7813837 (+)
G435002 NA non-coding upstream 36777 7799358 ~ 7799568 (+)
G435001 NA non-coding upstream 44859 7791240 ~ 7791486 (+)
G434940 NA non-coding upstream 54405 7744774 ~ 7781940 (+)
G435027 NA non-coding downstream 10358 7849297 ~ 7854339 (+)
G435028 NA non-coding downstream 18935 7857874 ~ 7858448 (+)
G435049 NA non-coding downstream 43831 7882770 ~ 7882983 (+)
G435050 NA non-coding downstream 44142 7883081 ~ 7883282 (+)
G435052 NA non-coding downstream 46306 7885245 ~ 7885455 (+)
G434545 NA other upstream 716486 7119317 ~ 7119859 (+)
G433724 NA other upstream 1706567 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 1728170 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 1850057 5975822 ~ 5986288 (+)
G432958 NA other upstream 2176176 5658928 ~ 5660169 (+)
CI01000306_09225597_09230504 NA other downstream 1386626 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 1434960 9263589 ~ 9289035 (+)
G435590 NA other downstream 1873910 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 2021274 9860480 ~ 9865724 (+)
G435639 NA other downstream 2040981 9878664 ~ 9884919 (+)

Expression


Co-expression Network