CI01000306_09125548_09137714


Basic Information

Item Value
gene id CI01000306_09125548_09137714
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9125051 ~ 9137754 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09125548_09137714.mRNA
ATATAAAAAACATTCTTTTTTTTTAGTGAGATCATCTTATCGATTTAGTGAGAGTTTTTCAGGTTACATACAATATTGTTTTCAAAATTTGTATTTCGATATTGCTCAGGTACAGTTCAAATTTTCCTCATAGTTTTATGTTATATTATGTTATATTAATACCACTAGTAAATAGAGTTGTATTTCCAAATTTTTCATTTTAAAAGCACATTGTGACGTTGTTGAAACCGCTGTGCAGTTTCTACAGCGACCTTCTTGAAACATTTACCCGAGCGACACTGAAGCAGTTCAGGTTCAGTAAAAGCTTTTGTTCTGTGAGTTTTAGAAGTTTCTGTTTTTTCATGTCAACTAGTTGTCAAAGCCTCAACTCCTGGTAAAACTGCTGTTACTGAAACACCAAAACCAAGTGAGTATTACTAATTATCTAAAATGAATCAGTCAGTACCAACTGAAAACAAATGGTGATCAATCTGATTTCTTGGTGACACAAAAAAAACATGGCTCATCATGGCACTGGCGGACACCGGCGGGAGGTTTTCCTGTCTGGACTGATGGGCGTCTGTCTGTTCTGCATCAGAAGTCAAATTTCTATTTTTATTATGTTTAGTCTTATGATCGCTTCTGTAGAAGCCATTTGCCAGAACCCAGTGTCAGATGATTTGATTGATGACAACAAGGAACCTTCTGAAGAAAATGAGGATGCCGTGTATTGCACCATCCCTGATGATTCTGACACTCATGTGTTAAGACAGTCTGGCTCAGATGCCAAATCATCTTCTGACAATTTAATTAATCGTTCACTTCTTATGGAGGTTCAGTCTTACAAATCTCCTGCTCTAAAAGTATCTCCAGATGTCATAAGAGAGTCCAGCTCAGTGAAGATGATCTGTGAGACTCCAGCAGATGTTGCAGTGAAACAGTGTTATTTCTACATAAACAGAGAAAAAGAGAATATAAAACTCAGTCCATCATGTGAGCTCAATCTCACTGGTGCTGAAGTGCTCAGATGGGCAGCTGTAAAATCACCTGTATCAGTCGACATTAACTGCTACTACATAATACCTGAAAACGGGATTGATAAATCATCTCATTCTCCTGCTGCCACAGTGACGGTTCTAGATCTTCCTCAGGCCAAGTTAACAGCATCTGCTTCAGTTATTAATGAAACAGACACAGTTCGGCTGAGCTGTGAGAATACTGAACATCTGAAGATGGAGATGTGTTACTTTAACATAAATGGAAGAGAAAGTAACTCAAAACAGAGCTCATCATGTCAGCTCTTTCTCACTGGATCTGAGATCAGTATTTGGTCAGAAGGTCAGAGTTCATCTGTGAGAATAACCTGCTTCTACACTGTGAAGAAGTCAAAAGTTCAAAAACCATCTCCTCACTCTGATCCAGTGACAGTAACAATCCAGATCTCGTGGCTTTCAGTAGTGCTGGTTTTCTCTGGTGTTGGTTTATTTCTGTCTGGACTCATGGGATTCATCTGTCTCTGCCACTTTGACAGTTCTGATGATGTTCTCACAGAGGTGAACTACAGCTCCTGCCAGCTTCTTATGGAGGTTCAGTCTTACAAATGTCCTGCCTTAACAGTATCTCCAGATGTCATAAGTGAGTCCAACTCAGTGAAGATGATCTGTGAGCACCCAGCAGGTGTTACAGTGGATCTGTGTTATTTCTACATAAACAGAGATGAGAAGAATATCAAATCTAATTGGTCATGTGAGCTCAGTCTCACTGGTGCTGAAGTGCTCAAATGGGCAGCTGTAAAATCATCTGTATCAATCAACATTAACTGCTACTACAAAACAACCGAGCACGGGATTAATAAACCATCATCTCATTCTCCTGCTGTCACAGTGAAGGTTAAAGAAACATGGTTTATAGTTCTGGTTTCCACTGGTGTTGGTGTCATTTTGACTGGATTCATCTGTCTGTGTCGGTTTGCAAGCCTCGAACACCCAGATTCCCACCAGGACAGCACACCAGATCCCACAGCGACTTCCTCTTTCATTATGGCTGAAAATTCAATTTACCAGCCCTCAGAAGATTTGGTCAATACTCAACAGAAAGAGGGAAATACAGCGGAAAATGAGAATGTTTACCACCTGTACTGCTCAATCCCTGACAAACCAGTTCACTCAAACGCAGCAGATCAAGTCTACAGTTTGGTGAAGATGCAATGATGAGCCTCAAGTCTTGTTTCATAATGTACATTCATTATAA

Function

NR:

description
hypothetical protein cypCar_00049007, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09125548_09137714.mRNA True 2229 mRNA 0.40 15 9125051 9137754

Neighbor

gene id symbol gene type direction distance location
CI01000306_09081250_09087963 LDLRAD2 coding upstream 36653 9081250 ~ 9088398 (+)
CI01000306_09049143_09051379 CYB561D1 coding upstream 73203 9049143 ~ 9051848 (+)
CI01000306_09034546_09046916 ATXN7L2, ATXN7L2A coding upstream 78107 9034439 ~ 9046944 (+)
CI01000306_09021191_09031657 SYPL2A coding upstream 93394 9021059 ~ 9031657 (+)
CI01000306_08984163_08984476 NA coding upstream 140347 8984163 ~ 8984704 (+)
CI01000306_09141075_09152779 NA coding downstream 3148 9140902 ~ 9152819 (+)
CI01000306_09155525_09189777 NA coding downstream 17596 9155350 ~ 9190162 (+)
CI01000306_09195793_09213433 NA coding downstream 56463 9194217 ~ 9214865 (+)
CI01000306_09216004_09219290 NA coding downstream 78075 9215829 ~ 9219563 (+)
CI01000306_09225597_09230504 NA coding downstream 87758 9225512 ~ 9231333 (+)
G435446 NA non-coding upstream 5539 9119175 ~ 9119512 (+)
G435438 NA non-coding upstream 35704 9089055 ~ 9089347 (+)
G435409 NA non-coding upstream 254174 8870560 ~ 8870877 (+)
G435408 NA non-coding upstream 254668 8870176 ~ 8870383 (+)
G435345 NA non-coding upstream 255227 8868477 ~ 8869824 (+)
G435447 NA non-coding downstream 12166 9149920 ~ 9150238 (+)
G435451 NA non-coding downstream 20698 9176768 ~ 9177266 (+)
CI01000306_09248061_09260369 NA non-coding downstream 109583 9247797 ~ 9260408 (+)
CI01000306_09263755_09288503 NA non-coding downstream 148075 9263589 ~ 9289035 (+)
G434545 NA other upstream 2005192 7119317 ~ 7119859 (+)
G433724 NA other upstream 2995273 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 3016876 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 3138763 5975822 ~ 5986288 (+)
G432958 NA other upstream 3464882 5658928 ~ 5660169 (+)
G435590 NA other downstream 575095 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 722459 9860480 ~ 9865724 (+)
G435639 NA other downstream 742166 9878664 ~ 9884919 (+)

Expression


Co-expression Network