CI01000306_09141075_09152779


Basic Information

Item Value
gene id CI01000306_09141075_09152779
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9140902 ~ 9152819 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09141075_09152779.mRNA
TTATAAAAAATGTCACCTGTGGCCCAGATCTGCTGTACATGTGGTCTCATGATGTACGTTCATCTTCATAAAACTGACTGCACAATCATTAAATGTTTCCTGTGGTCTAATGTGTTACTTACTAATTCACACATTGTTTGAGACTCGTTCTGTCTCTTTTGTCACTCGCTGTAATGGAGTTGTTCATCTTCGTTGCTTTTCAGCTTCTTATGGAGGTTCAGTCTAACAAATCTCCTGCCTTAAAAGTATCTCCAGATGTCATAAGTGAGTCCAGCTCAGTGAAGATGATCTGTGAGCACCCAGCAGGTGTTAAAGTGGATGTGTGTTATTTCTACATAAACAAAGATGAGAAGAATATAAAATCGAATTGGTCGTGTGAGCTCGATCTCACTGGTGCTGAAGTTCTCAGATGGGCAGCTGTAAAATCATCTGTATCAATCAACATTAACTGCTACTACAAAACAACCGAGCACGGGATTAATAAACCATCATCTCATTCTCCTGCTGTCACAGTGAAGGTTAAAGTAGTGCTGGTTTTCACTGGTGTTGGTTTATTTCTGTCTGGACTCATGGGATTCATCTGTCTCTGCCACTTTGACACTTCTTATGGAGGTTCAGTCTTACAGTTCAGCAACCACCACCACAGCACGTACTACTACTACAACCACCACTGCACAAACTACTACAACAACCCTGAAAATCTCAAAATTCAGTATGTGTTTTCAACAGCATTAACTGTAAAGTCCACTTCTGAAACCACAACATACAGTAAAACTGCGGTTTCTAGTGTTCACACTTCAACAGCTGATCCTGAAGATCATCCACTCACACCACTACACAGAGAAACATGGTTTATGGTGCTGGTTTCCACTGGTGTTGGTGTCATTTTGACTGGATTCATCTGTCTGTGTCAGTTTGCAAGCCTCGGACACCCAGATTCCCATCAGGACAACACACCAGATCCCACAGCGACTTCCTCTTTCATTATGGCTGAAAATTCAATTTACCAGCCCTCAGAAGATTTGGTCAATACTCAACAGAAAGAGGGAAATACAGGGGAAAATGAGAATGTTTACCACCTGTACTGCACGATCCCTGACAAACCAGTTCACTCAAACGCAGCAGATCAAGTCTACAGTTTGGTGAAGATACACTGATGAGCCTCAAGTCTTGTTTCATAATGTACATTCATTATAA

Function

NR:

description
hypothetical protein cypCar_00049007, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09141075_09152779.mRNA False 1197 mRNA 0.41 11 9140902 9152819

Neighbor

gene id symbol gene type direction distance location
CI01000306_09125548_09137714 NA coding upstream 3148 9125051 ~ 9137754 (+)
CI01000306_09081250_09087963 LDLRAD2 coding upstream 52504 9081250 ~ 9088398 (+)
CI01000306_09049143_09051379 CYB561D1 coding upstream 89054 9049143 ~ 9051848 (+)
CI01000306_09034546_09046916 ATXN7L2, ATXN7L2A coding upstream 93958 9034439 ~ 9046944 (+)
CI01000306_09021191_09031657 SYPL2A coding upstream 109245 9021059 ~ 9031657 (+)
CI01000306_09155525_09189777 NA coding downstream 2531 9155350 ~ 9190162 (+)
CI01000306_09195793_09213433 NA coding downstream 41398 9194217 ~ 9214865 (+)
CI01000306_09216004_09219290 NA coding downstream 63010 9215829 ~ 9219563 (+)
CI01000306_09225597_09230504 NA coding downstream 72693 9225512 ~ 9231333 (+)
CI01000306_09248061_09260369 NA coding downstream 94978 9247797 ~ 9260408 (+)
G435446 NA non-coding upstream 21390 9119175 ~ 9119512 (+)
G435438 NA non-coding upstream 51555 9089055 ~ 9089347 (+)
G435409 NA non-coding upstream 270025 8870560 ~ 8870877 (+)
G435408 NA non-coding upstream 270519 8870176 ~ 8870383 (+)
G435345 NA non-coding upstream 271078 8868477 ~ 8869824 (+)
G435451 NA non-coding downstream 5633 9176768 ~ 9177266 (+)
CI01000306_09263755_09288503 NA non-coding downstream 133010 9263589 ~ 9289035 (+)
CI01000306_09296908_09305617 NA non-coding downstream 153126 9296809 ~ 9306977 (+)
G434545 NA other upstream 2021043 7119317 ~ 7119859 (+)
G433724 NA other upstream 3011124 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 3032727 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 3154614 5975822 ~ 5986288 (+)
G432958 NA other upstream 3480733 5658928 ~ 5660169 (+)
G435590 NA other downstream 560030 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 707394 9860480 ~ 9865724 (+)
G435639 NA other downstream 727101 9878664 ~ 9884919 (+)

Expression


Co-expression Network