CI01000306_09216004_09219290


Basic Information

Item Value
gene id CI01000306_09216004_09219290
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9215829 ~ 9219563 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09216004_09219290.mRNA
TTATAAAAAAATGTCACCTGTGGCCCAGATCTGCTGTCCATGTGGTCACATGATGTACATTCATCTTCATAGAACTGACTGCACAAAGTATTAAATGTTTCCTGTGGTCTAATGTGTTACTTCCTAATTCACACATTGTTTGAGACTCGTTCTATATTTTTTGTCACTCGCTGTAATGGAGTTGTTCATCTTCATTGCTTTTCAGCTTCTTATGGAGGTTCAGTCTTACATCAGAGCTGATTTCACCTGTAGTCTCTACACTGAGGATGATCTTCTGCACTCTCAGAAGAGACAGTCTGGAGAACGTCTTTGTATGTTTTATGTAACTCCTGGTGAACTCTTGACACGATCAGTGAACAGACAGCTGAGCTGTGATTATTCACTCAACACTGAACCTGAGATCAGATCACCGCGCAGTGAAACATACACCATCAGAGGATGGAGAAGTGTGTCAGCATGTCAGCTCTCACTCACTGGATCTCAGATCAGTATTTGGTCAGAAGGTCAGAGTTCATCTGTGAGAATAACCTGCTTCTACACTGTGAATTTGTCACAAGGTCAAAAATCATCTCCTCACTCTGATCCAGTGCCAGTGACAGTCCAAATTTCCATTGTAACCTCTACTCTGCCAGATATCAGAAGTATGTCAGGACATGGTTCTGATGATGTTCTCACAGAGGTGAACTACAGCTCCTGCCAGGTGGAAACAACATCTCTGTTAACTTCCTCTGTGTGCTCCAAAAAGCATGGATGAAACGCTTAATTTCTTCACTTGTTGCACCTTTAAAGAGAAAAAAATGATGTGTTCAGAAAGAATGATAGTAGCCTATATTTACAGTATTTAGTTGTTGAAAACATTTACTAATCAGCAGGCCAAGGCAGCTTGGAGGTTTTTCCCACATTTTGATTTTGGGAGAAAATAGATTTTATATTGGTTAAATATATTAACTGTAGCTGAAAGCATCTTCAAGTCATCTGTAGAGTTCAGTGATGCAGATTCACTGACAGATTTAAAGCATCAAACATA

Function

NR:

description
hypothetical protein cypCar_00049007, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09216004_09219290.mRNA False 1027 mRNA 0.40 5 9215829 9219563

Neighbor

gene id symbol gene type direction distance location
CI01000306_09195793_09213433 NA coding upstream 964 9194217 ~ 9214865 (+)
CI01000306_09155525_09189777 NA coding upstream 25667 9155350 ~ 9190162 (+)
CI01000306_09141075_09152779 NA coding upstream 63010 9140902 ~ 9152819 (+)
CI01000306_09125548_09137714 NA coding upstream 78075 9125051 ~ 9137754 (+)
CI01000306_09081250_09087963 LDLRAD2 coding upstream 127431 9081250 ~ 9088398 (+)
CI01000306_09225597_09230504 NA coding downstream 5949 9225512 ~ 9231333 (+)
CI01000306_09248061_09260369 NA coding downstream 28234 9247797 ~ 9260408 (+)
CI01000306_09263755_09288503 NA coding downstream 44026 9263589 ~ 9289035 (+)
CI01000306_09296908_09305617 NA coding downstream 77246 9296809 ~ 9306977 (+)
CI01000306_09361874_09367807 PARAPINOPSINB coding downstream 142311 9361874 ~ 9367838 (+)
G435446 NA non-coding upstream 96317 9119175 ~ 9119512 (+)
G435438 NA non-coding upstream 126482 9089055 ~ 9089347 (+)
G435409 NA non-coding upstream 344952 8870560 ~ 8870877 (+)
G435408 NA non-coding upstream 345446 8870176 ~ 8870383 (+)
G435345 NA non-coding upstream 346005 8868477 ~ 8869824 (+)
G435554 NA non-coding downstream 216982 9436545 ~ 9480093 (+)
G435540 NA non-coding downstream 382864 9602427 ~ 9603396 (+)
G434545 NA other upstream 2095970 7119317 ~ 7119859 (+)
G433724 NA other upstream 3086051 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 3107654 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 3229541 5975822 ~ 5986288 (+)
G432958 NA other upstream 3555660 5658928 ~ 5660169 (+)
G435590 NA other downstream 493286 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 640650 9860480 ~ 9865724 (+)
G435639 NA other downstream 660357 9878664 ~ 9884919 (+)
CI01000306_09475675_09494799 TKTA coding downstream 219841 9475531 ~ 9495855 (+)
CI01000306_09500798_09514840 BICD2 coding downstream 244785 9500475 ~ 9515321 (+)
G435589 NA non-coding downstream 441739 9697429 ~ 9698325 (+)
CI01000306_09891658_09893015 SNRPE other downstream 635842 9891532 ~ 9893239 (+)

Expression


Co-expression Network