CI01000306_09248061_09260369


Basic Information

Item Value
gene id CI01000306_09248061_09260369
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9247797 ~ 9260408 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09248061_09260369.mRNA
GTATAAAAAGAAGAAAACTGTAAGTTTTATTTTGTTTTTTATGGTTTTAGTTTCAGTTTTCATAACCCTAATTAATTAAGGTTAATTGGGGTTATTAAATATAATAACCCTAATTGTAGGTTTTATTTTATTATTTTATTATTTTTTTTAAAAAATGTATTTTTGTAGTCTATGAGCTATATGTGCAAATGTTTATCACCTTATCTGATATATGCATGCATGAAAAGATGCCATAAAGATTAATATTTGATTCTTAGCAATAAAATGAGATCAATAACATCAGATGTGCCCAGTCAAGGAATTGGTATGAGTTCTGGACCTGCAGAGACATATTCTCTGATCACTTCTGTACCGGCCACATCTCAGCCCATATCTGTGGGCCTCGAACACCCAGATTCCCATCAGGACAACACACCAGATCCCACAGCGACTTCCTCTTTCATTATGGCTGAAAATTCAGTTTACCAGCCCTCAGAAGTTTTGGACAGTACTCAACATAAACAGGGAAATACATCGGAAAATAAGGTAATATGTGAACAGTCACACCCCAAACCATGCACGGCGCCATGCACAGGGTTGGGGGTCTCGTGGCTTTCAGTAGTGCTGGTTTTCACTGGTGTTGGTTTATTTCTGTCTGGACTCATGGGATTCATCTGTCTCTGCCACTTTGACAGTTCTGATGATGTTCTCACAGAGGTGAACTACAGCGCCTGCCAGCTTCTTTTGGAGGTTCAGTCTAACAAATCTCCTGCTTTAAAAGTATCTCCAGATGTCATAAGTGAGTCCAGCTCAGTGAAGATGATCTGTGAGCACCCAGCAGGTGTTGCACTGAATACGTGTAATTTCTACATAAACAGAGATGAGAAGAATATAAAAGCCACTTGGTTATGTGAGCTCGATCTCACTGTCTCGTGGCTTTCAGTAGTGCTGGTTTTCACTGGTGTTGGTTTATTTCTGTCTGGACTCATGGGATTCATCTGTCTCTGCCACTTTGACAGTTCTGATGATGTTCTCACAGAGGTGAACTACAGCTCCTGCCAGGTGGAAACAACATCTCTGTTAACTTCCTCTGTGTGCTCCTCAAAACATGGATGAACCGCTTCATTTCTTCACTTGTTGCACCTCTAAAGAGAA

Function

NR:

description
hypothetical protein cypCar_00049007, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09248061_09260369.mRNA False 1134 mRNA 0.40 10 9247797 9260408

Neighbor

gene id symbol gene type direction distance location
CI01000306_09225597_09230504 NA coding upstream 16464 9225512 ~ 9231333 (+)
CI01000306_09216004_09219290 NA coding upstream 28234 9215829 ~ 9219563 (+)
CI01000306_09195793_09213433 NA coding upstream 32932 9194217 ~ 9214865 (+)
CI01000306_09155525_09189777 NA coding upstream 57635 9155350 ~ 9190162 (+)
CI01000306_09141075_09152779 NA coding upstream 94978 9140902 ~ 9152819 (+)
CI01000306_09263755_09288503 NA coding downstream 3181 9263589 ~ 9289035 (+)
CI01000306_09296908_09305617 NA coding downstream 36401 9296809 ~ 9306977 (+)
CI01000306_09361874_09367807 PARAPINOPSINB coding downstream 101466 9361874 ~ 9367838 (+)
CI01000306_09475675_09494799 TKTA coding downstream 215123 9475531 ~ 9495855 (+)
CI01000306_09500798_09514840 BICD2 coding downstream 240067 9500475 ~ 9515321 (+)
G435451 NA non-coding upstream 18193 9176768 ~ 9177266 (+)
G435447 NA non-coding upstream 19205 9149920 ~ 9150238 (+)
G435446 NA non-coding upstream 128285 9119175 ~ 9119512 (+)
G435438 NA non-coding upstream 158450 9089055 ~ 9089347 (+)
G435409 NA non-coding upstream 376920 8870560 ~ 8870877 (+)
G435554 NA non-coding downstream 176137 9436545 ~ 9480093 (+)
G435540 NA non-coding downstream 342019 9602427 ~ 9603396 (+)
G435589 NA non-coding downstream 437021 9697429 ~ 9698325 (+)
G434545 NA other upstream 2127938 7119317 ~ 7119859 (+)
G433724 NA other upstream 3118019 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 3139622 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 3261509 5975822 ~ 5986288 (+)
G435590 NA other downstream 452441 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 599805 9860480 ~ 9865724 (+)
G435639 NA other downstream 619512 9878664 ~ 9884919 (+)
CI01000306_09891658_09893015 SNRPE other downstream 631124 9891532 ~ 9893239 (+)

Expression


Co-expression Network