CI01000306_09548430_09553502 (WNK2)


Basic Information

Item Value
gene id CI01000306_09548430_09553502
gene name WNK2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9548430 ~ 9553502 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09548430_09553502.mRNA
ATGGGTATTGCAAACTACCTCACAAAAAGATTCACTGATTCAGTGATCTTGATGCATCACAATATCATAATCAGACTGGGATTGAGCAAGAGAGACCCAGCATGTTTATGTGAAGAGTGTGAAACTGTGGAATCAGTTGTGGTTTGCTTCACATCTCATAAAAATTCAGAAGCCTGTGGCACAGCGCCTCCATCAGGAGGAAGTGATCCCTATGGGGTTTGGAGCCCCCTCTCTTTGACCACTACTGATCCTCTTTCTCTGGCTGCTCTTTCCCAAGCTCCCCCTGCCCCGCAAGCCGCTGCAATGCCAGCTCAGTCTGCTTCCCATTCAGAGGAAGGGCCAAATTTAGGCTCCACCCAGGTCAATGTGCAGCAATCTCAGCCATACATGGATCCTCAAAGTTCTCTTTTTGTGGATGAGACACAGAGTGGCAGATTAGGCTCGGTCTCCCCCATGCACACTGCTCAGCAGATGGCTGAAATTGCATGTGCTGTCTCCATCGTGGAGGATGTGCCCTGCTGTCCCTTGGTCATGCCACTGTCCCTAGAAGTGAGCAGTGGGGCTCAGAGGTCATCCTCTGTGATGCCACCTCCATCACAAGACACTACTTCTGCTCGCGAACAACTTCACTCCATTACATCTAGTCGAGTGGAACGTGCCCAACAGCCTGTGGTGTTGCAGCAGCCTGTGTCCACTGTGAGTGGAACTAAGGCACCTTCCCTGCCCCAAAGCCCCGCCCCTTCACAGCACCACTTTGTTCCTAGTGAATCAGACGGAGAGGGGCGTAGCAGAGGAGGGTTTGTAGACAGCACTATCAAGACACTGGATGAGAAACTGAGGAATTTACTGTATCAAGAGTATGCTCCCATGTACCCATCGGGAAGTGCTGCTGAAACACCAGGATCTGGCACAGAGTATATCCAGTCCCCACCAGGACCAGAGTGTGCATTAGGAGGGTCAGGAACCAGCACACCTAGTCTTATGGGAGAGGGACGATTCAGAGCAGGAGAGCAGTTGTTCCTGTGTCAAGGAGACATGCAATGCCACACTCTACCTCTTGCTCTGGATCTAGAAGTCGATATAAGGTACATCATGTACATCTTATTTCTGCAGGACAATACAGGTTTAAAGATTGTTGATTTCCAGTTTAATAATCTAGGTGCCCACTTTGAGTTGATGATGCCTAGCGCCACTGACATCCTGTCAGGTCAAGGTCGAAAGCAGCGCAGCCTGAGCAGCACAGCATCTCCAGCACACCCTGGTGGCTTTTTGGGAGAATGTGCCATGTACGAAGAGCCGACTGTTTCAGCCACCACTGTCGGCAGGTTCTCAGTGGTCAGCACAGAAGATGAAGTCACGCGCAGAAAGAACACCAGCAGATATTCTGCCCCACCTGACTTTTATCTGGACGCACCACCTCCCCTGACCAAACGAGGCTCTCTGCCAAGGACACAGACTTCAGTCTCAGCGGATGTCACTGTTCACACCCGCTTCATGTCTTCTGACTCTGGGGCAGAGAGCAGCCCTGCCAAAATGGCACCTACAACCCCGTCCCGCCATGGGAGGTCTGAAAGGAGAGGAAGTGACCTCATGAAAAGGGCGGTGGCTTTTCTAAGGCGCTCTGGCCGCAGCAGTAGTGTGCAAAGCTCTGATTCGCCAAGCAGAAAGGGAGGGGTGTATGGATCCTGTATCAGCAGTGACAATGACTCCGAGATGGAGGACTCTGATATAAAGAGGGAGCTTCAGAGACTAAGAGAAAAGCACATGAAAGAGATAACCGAATTGGAGGCCCACCACAGAGAAGAGGTTGAGCTTCTCTATATCAGATTAGGGAAACCACCCCCTCCAGGTCTTTACATCCCACCCACAGCACCCCCTGCTGGACGCAAGCGCAAGACCAGCAGGCACAAACTAAAAGCTGGCAAACTGCTCAGTCCTTTAGTACAACAGCTGAGAAATGTTGCCTCTAAAACTAGCGACTCCAGCAAACCTAATGATTTAACAAAATCAGCTGAAGCGACCCTGAGCTTGAATGGGTCTCCTGCCAGGGCTTCCAACTTGTCAGATGGCAGGGCTTATTCTGGGACCGGGACTCTGCCTTGTTCTGTGTCTGAGCCGGTTCAGACCCAACAACCATGCTCTCTTAAAGGATCTCTCTCTTCCGACAACATCTACTCTGGTCTACAGGGAGAAGGACCTGGGCCACGCATCCAGCCTGGCCAAGGGTCAACACTTAAACGCCTGTGTCTGGGTAAAGAACGTGGCAGCAGATCTGGAGCAGCGTCAGCTGCCTCTAATCAGTCCCCAATGCCTCCTGGATCAACTCCTCCTCCTCACCAGCCAATTGGTCTCGCTCAAGCACAGACTAACAACAGCAACAACAAGACAGATGCATTCACACAGCAGCTTCAGAGATTTGGAGATAACTGGGCAGAAGAAGAAGAGAGGGCTCCTTCACGCTCACAATCCCTCAGTCTAAGACCACAGCAACTGACCCGATCCAGGATCTGGAGCTCTACAGAG

Function

symbol description
wnk2 Predicted to enable chloride channel inhibitor activity; potassium channel inhibitor activity; and protein serine/threonine kinase activity. Predicted to be involved in several processes, including intracellular signal transduction; protein phosphorylation; and regulation of metal ion transport. Predicted to be active in cytosol. Orthologous to human WNK2 (WNK lysine deficient protein kinase 2).

GO:

id name namespace
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08867 WNK, PRKWNK; WNK lysine deficient protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09548430_09553502.mRNA True 2523 mRNA 0.51 8 9548430 9553502

Neighbor

gene id symbol gene type direction distance location
CI01000306_09536090_09548281 NA coding upstream 149 9533915 ~ 9548281 (+)
CI01000306_09518431_09519858 CARD19 coding upstream 27710 9517962 ~ 9520720 (+)
CI01000306_09500798_09514840 BICD2 coding upstream 33109 9500475 ~ 9515321 (+)
CI01000306_09475675_09494799 TKTA coding upstream 52575 9475531 ~ 9495855 (+)
CI01000306_09361874_09367807 PARAPINOPSINB coding upstream 180592 9361874 ~ 9367838 (+)
CI01000306_09559074_09602026 NA coding downstream 5476 9558978 ~ 9602246 (+)
CI01000306_09625036_09626067 NA coding downstream 71458 9624960 ~ 9626941 (+)
CI01000306_09656951_09671072 NA coding downstream 101893 9655395 ~ 9671766 (+)
CI01000306_09674684_09680504 CRELD1 coding downstream 119273 9672775 ~ 9680673 (+)
CI01000306_09851578_09857742 HP1BP3 coding downstream 297725 9851227 ~ 9858552 (+)
G435554 NA non-coding upstream 68337 9436545 ~ 9480093 (+)
CI01000306_09296908_09305617 NA non-coding upstream 242263 9296809 ~ 9306977 (+)
CI01000306_09263755_09288503 NA non-coding upstream 259868 9263589 ~ 9289035 (+)
CI01000306_09216004_09219290 NA non-coding upstream 292740 9215829 ~ 9219563 (+)
G435540 NA non-coding downstream 48925 9602427 ~ 9603396 (+)
G435589 NA non-coding downstream 143927 9697429 ~ 9698325 (+)
G435590 NA non-coding downstream 151205 9704707 ~ 9737144 (+)
G435609 NA non-coding downstream 192332 9745834 ~ 9748829 (+)
CI01000306_09860935_09865155 SH2D5 non-coding downstream 310644 9860480 ~ 9865724 (+)
CI01000306_09225597_09230504 NA other upstream 321924 9225512 ~ 9231333 (+)
G434545 NA other upstream 2428571 7119317 ~ 7119859 (+)
G433724 NA other upstream 3418652 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 3440255 6106143 ~ 6108175 (+)
G435639 NA other downstream 326418 9878664 ~ 9884919 (+)
CI01000306_09891658_09893015 SNRPE other downstream 338030 9891532 ~ 9893239 (+)
G436932 NA other downstream 1529486 11082988 ~ 11098376 (+)

Expression


Co-expression Network