CI01000306_09559074_09602026


Basic Information

Item Value
gene id CI01000306_09559074_09602026
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9558978 ~ 9602246 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09559074_09602026.mRNA
TTTTAAAAGGGGCAGTGTCTGTGCCCTGCCTTTGATAACCAATAGTGGCTTCATTACAGTTGTTAGTTGTATTTTTCGATTAATTCTCAGATCACCATGGACAAAGCTGCACTGAGACTAACTTTGTTTGGCCTTCTGTTCACTTGTGTCAACTTGGCTGCTAACAAGAAACAAGATATAGATATTTACAGCTTCCACATTAACTCTACGATCACCAGCCGCTACGCTACCACAGTCATCACAAGCCGTGTGGCAAACCTGTTAACTCAATCTCAAGAGGTCCATTTTGAGGTCAAGATACCCAAGAATGCATTCATCAGCCAGTTTAGAATGACCATAGAGGGGAACACATATGATGGAGTTGTGAAGGAAAAAGAGGAAGCTCAGCGGGAATACAGTGAAGCAGTATCTCGAGGAGAAAGTGCTGGACTGGTCAGTGCTGTTGGAAGGACTTTTGAAGACTTTAAAACATCAGTGACAGTAGCTGCTCTCAGTAAAGTGACCTTTGAGTTGACCTATGAAGAACTGCTAAAGCGTCGCCTCGGCAAATACGAGTTACTCATCAATGCCCAACCGATGCAGCCGGTGGCAGACTTCAAGATTGACGTACACATCCATGAGAATCCAGGAATTTCTTTCTTGGAGGTCAAAGGTGGTCTGAGCACTAAGGATCTGGCCAATGCTGTCACAACCATCAGAGCAGACAAAGATGCATGGGTGAAGTTCTACCCCACTCGTGACCAGCAAACAAAATGTGATGATTGTAGTAAAAATGGTCTGAATGGCAACCTGATCATTATGTATGATGTTGAGAGACTAAAACAAAGTGGAGATCTGAAGGCATCAGAAGGCTACTTTGTCCACTACTTTGCACCTACAGATATTCAGCGCATTCCCAAAAATGTGGTGTTTATTATTGACCAGAGTGGCTCCATGTCAGGCAAAAAAATAGAGCAGACTCGTTTGGCAATGCTGAGGATTTTGAGTGACCTTGCAGAGGATGACCACTTTGGATTGATTACATTCAATGGTTACATTCAAACTTGGAAATCTGAACTTCTCAAAGCTACTGAAGGAGATGTGGAAGAAGCAAAGACGTTTGTGAAGAGGATTACAAGTGGAGGATGTGAGACCGACCCAGTGGAGATTCAGAAAAATGTGAAAAAGGCCATTGATGGAAAATTCCCTTTATACTGTTTGGGTTTTGGGTTTGATGTCAGCTTTGAGTTCCTGGAGAAGTTGTCATTGGAAAATAACGGTGTTGCTCGCAGGATCTATGAGGATTCTGATGCCGATCGACAACTGCAGGGTTTCTACGAGGAAGTGGCCACTCCACTCTTGATTGATGTCCACCTTAACTACCAAGGAGTGGCCAATTTAACCCAAACCACTTTCAGCCAGTACTACAATGGTTCTGAGATTGTGGTGGCTGGTCAGATCACTGATAACAGTTTGGAAAGTTTCACCACTGAAGTCATTGCATTATCGAAAAGCAATAAGGTGGTATATCATAACAATGTACCTACAGACGAACTAAACAGTGACAGACCTGAAAATGAGAACTTAATTAAAAGATTATGGGCCTTCCTTACAGTAAAGCAGCTACTGGAGAAAGAAGTGCTTCTAAAAGGCCTGGAAAAAGACAATGCAAAGAAAGAAGCCCTTGATCTTTCTCTGAAGTACAAATTTGTCACGCCGCTTACATCAATGGTGGTCACCAAACCCCAGGATGAGGAAATGCAGGTTGCCCACAAACCCAAAGAGGGAGAGCAGCGACAAACAAATAGAAGGCAGTCTAGACTGAAGTCCAGGCCCAGTTACAGTTATTCTTCATTAAGTTACAGACCTTTTGGTCCTTCAGGTGGTCCTTCAGTGAAGAGCATTAGGATTTTGAAATCTTCTGGTAATGCTAAGCCACTTTGTTATGATGTTCCTCTTGCTCAGAAACTCAGACTCCTACAAAATGACTTATCAGAGTTTTCTATGAATGGCCAACTTGAGATAATTGGAGGGAAAGGCTTCAGTCAGATTGCAATTCGTTACAAAACGCATCAACATCTGCTGCTCAGCACTAGTGAGATTTCCTACTTTGATGGACAGGACACTGTGAAGTTCTCATGGGATCAAGGCGTCACCCACCATGAGACAGAACACGTGTCTCTGATTCTACGGAGTAATGAAATGGACATTACCATGGGAAACATACGCGTTGTCATTCTTCTTCATAAGAAAGATGAAGTTTTTCTGTGGCCTGCCGTTTGGCAACAGCCAAAAGATGCCGGTTTGAAAGGAATTTTAGTTCACAACTTGTTAAGAAGAAACAAGATGTTGATATATATATACAGCTTCTACATTAACTCCACGGTCACCAGTCGCTACGCCACAACGATCATCACAAGCCGTGTGGCGAACACACTGAATGAATCTCAAGAGATCCAGTTTGAGGACAATAGAGGGGAAGACATGATGATGGCGTTGTTAAGGAAAAAGAGGACGCTCAGCAGCAATACAGTAAAGCAGTATCTTGAGGACAAGTGCTGGACTAATCAAGTGATCCCAATGCGTCTCAATGCAGCTCGAAGTTCCCATGAAAGGGAATCAGGAATTTCCTTCTTGGAGGTGAAAGGAGATTTGAGTACCGGTGATCTGGCCAATGCCATCAAAACCACCAGAGCAGACAAAGACGGCTTCAATCTCAATGGCTCTGAGATTGTGGTATCAGGACAAATCACAGACAACAGTGTGGAGAGTTTCAGGACTCAAGTCATTGCTGTATCAGTACCCTGGGATGAGACTTATTTAAAATGGTGCTTTCAATGCGGATTGGATGATGAACTCGCTGAACTCACGCCCTCGGTTGAGCAACCCTCTACGTTATGCCAGCAAATGGACTTTATTTTGTTTCTTTGTGGATCAAGCTTCACTATCACCATGGACAAAGCTGCACTGAGACTAACTTTGTTTGGCCTTCTGTTCACTTGTGTCAACTTGGCTCCTAAGAAGAAACAAGATATAGATATTTTCAGCTTCCACATTAACTCTGTGATCACCAGCCGCTACGCTACCACGGTCATCACAAGCCGTGTGAAAAACCTGTTAGCTCAATCTCAAGAGGTCCTTTTTGAGGTCAAGATACCCAAGAATGCATTCATCAGCCAGTTTAGAATCTTCTACCATTTGTCTAATAACCCCAGTTTCATTTCTGATTACTGTACTTTCCGCATTAGGACCATAGAGGGGAAGACATATGATGGAGTTGTGAAGGAAAAAGAGGAAGCTCAGCGGGAATACAGTAGAGTAGCATGTCTAGGACAAAGTGCTGGACTGGTCAGGACTTTTGAAGACTTTAAAACATCAGTGACAGTAGCTGCTCTCAGTAATGTGACCTTTGAGTTGACCTACGAAGAACTGCTAAAGCGTCAGCTTGGCAAATATGAGTTACTCATCAATGCCCAACCGATGCAGCCGGTGTCAGATTTTGAGATTGACGTACACATCCATGAGAATCCAGAAATTTCTTTCTTGGAGGTCAAAGGTGGTCTGAGCACTAAGGATCTGAACAATGCTGTCTCAGCCTTCAAATTAGAAAAAGATGCATGGGTGAAGTTCTTACCCACTCGTAAACAGCAAACAGAGTGTGACGATTGTAGTGAAAATGGTCTGAATGGCAACCTGATCATTACATATGATATTAAGAGATTTAAACAAAGAGGAGATCTGGAGGCATCAAAGGGCTACTTTGTCCACTGCTTTGCACCTACAGATATTCAGTACATTTCCAATAATGTGGTGTTTATTATTGACCAGAGTGGCTCCATGTCGGGCAAAAAAATGGAGCAGACTCGTTTGGCAATGCTGAAGATTTTGAGTGACCTTGCAGAGGATGACCACTTCGGATTGATTACATTCAGTGATCGAATTCGAACCTGGAAACCTGAACTTCTCAAAGCCACTAAAGGAAATGTGGAAGAAGCAAAGATGTTTGTGAAGGGGATTACAAGTGATGGAAACACAGACATGAATGCTGCACTGCTAAAAGCTGTGGACATGATCAACAAACACCAACAAGAGGGATCTGCATCCAAATTGATCCTGTTGACTGATGGAGATCCCACTGCAGGCACAAAACAACTGATTCACTCATGCACACACACTTGTGAGACCAACCCAGTGGAGATTCAGAAAAATATAAAAAAGGCCATTGGTGGAAAATTCCCTTTATACTGTTTGGGTTTTGGGAAAAATGTCATCTTTGAGTTCCTGGAGAAGTTGTCACTGGAAAATAACGGTGTTGCTCGCAGGATCTATGAGGATTCTGATGCCGATCGACAACTGCAGGACTTCTACAAGGGAGTGTCCACTCCACTCTTGACTGATGTCGAGCTTAGCTACCAAGGAGTGGACGATGTAACCCAAAACACTTTTAGCCAGTACTACAGCGGTTCTGAGATTGTGGTGGCTGGTCGTATCATTGATAACAGTTTGAAAATGTTCACCACTGAAGTCTCTGCATTATCGAAAAAAACTAAAATGGTGTATCAAATTAGTGTACCTATACAGAAACAAAACAGTGACAGACCTGGACAGGCGAACTTTACTGAAAGATTATGGGCCTTCCTTACAGTAAAGCAGCTACTGGAGAAAGAAGTGACTCTACAAGGCCTGGAACAAAACAAAGCAAAGACAAAAGCTATTGATCTTTCTCTGAAGTACAAATTTGTCACGCCGCTAACATCAATGGTGGTCACCAAACCCCAGGATCAGAAAATACAGGTTGTCCACAAACCCAAAGAGGGAGAGAAACCAACTATTCCACCAACATCGTCAGTGAAGAGCATTAGGATTTTGAAATCTTCTGTTAATGCTAAGCCACTTTGTTACGATGTTCATCATGTTGCTCAGAAATTCAGGCTCCTACAAAATGACCTATCAGAGTTTTCAATGAATGGCCAGCTTGAGACAATTGGAGGGAAAGGCTTCAGTCAGATTGCAATTCGTTACAAAACGCATCACCATCTGCTGCTCAGCACTAGTGAGATTTCGTACTTTGATGGACAGGACACTGTCTGCACAGGCTTCAAACTGAAGCCCGAACCCGGCCCGAACCGGAGATCGTTTGACCCGACCCAACCCTGTCGCTACGCCACAACGGTCATCACAAGCCGTGTGGCGAACACACTGAATGAATCTCAAGAGATTCAGTTTGAGGTCAAGATACCCAAAACTGCCTTCATCAGCAAATTCAGAATGACCATAGAGAGGAAGACATATGATGGTGTGGTGAAGGGAAAACAGGAAGCTCAGCAGCAGTACAGTGAAGCAGTATCTCGAGGACAAAGTGCTGGACTGATCAAATCTGTTGGAAGGACTTTAGAAGACTTTAAAACTTCAGTGACGGTGGCTGCTTTTAGTAAAGTGACCTTTGAGTTGACCTATGAAGAACTGCTAAAGCGTCGCCTCGGCAAATATGAGTTACTCATCAATGCCCAACCGATGCAGCCGGTGGCAGATTTCAAGATGGATGTACACATCCAAGAGAAACCAAGAATTTCCTTCTTGGAGGTGAAAGGAGATTTGAGCACCGGTGATCTGGCCAATGCCATCAAAACCACCAGAGCAGACAAAGACGCATGGGTGACCTTCTACCCCACTCGAGATCAACAGACCAAGTGTAAAAGCTGTGGAGAAAATGGACTGAATGGTGACCTGCTTATAACATACGATGTTGAGAGACAAAATCCTAAAGGAGAAGTTATGGTATCAAATGGCTATTTTGTCCACTACTTTGCACCCTCTGATGTTCCACGTATTCCCAAAAATGTGGTGTTTATCATTGACTGGAGCGGTTCTATGCGAGGCAGAAAAATAGATCAGAAGCGTGAACTCCTAAAGGCTACCAAGCAAAAACTGAAGAAAGCAAAATCTTTTGTGAAGGAGATCAGAGATAGAAGAGGTGAAACTAACATAGAGAGGATAATGGCCAATGTGAAAGAGGCCATTGGGCTGAAGTTTCCCCTCTATTGTCTTGGTTTTGGACATGATGTTAACTTTGACTTCCTGACAAAGATGTCACTGGAAAATGGTGGAGTTGCTCGCAGGATTTATGAAAATTCGGACGCTGATCTACAGCTGCAGGGCTTCTATGAGGAAGTTGCCGTCCCTCTCCTCACTGATATTCACCTTAAATACACAGGAGGGACAAACCTTACCAAGACCAGCTTTACCCTGTACTTCAACGGCTCTGAGATTGTGGTATCAGGACAAATCACAGACAACAGTGTGGAGAGTTTCACCACTGAAGTCATTGCAGTATCAGTAAAGTTATTGGTGAAAGTTGTAATGACAGCATTCCTGATGAAAATGTTCATTAGTATTATTACTTCTGAGCAGAAAGGCAGTAGTGTGACGTATCAAGACACTGTAATGATAAAAGACCCCAGTGATGTCCCACCTGAGAATGAAGATTTCATGCAGAGACTGTGGGCCTACCTGACAGTCAAGCAACTTCTAGAAAGGCAGGTGCTTCTTAAAGGACAAGAGAAAGAGGATGAAGAGAAAGAAGCTCTCAAACTCTCTCTGAAATACCAGTTTGTCACCCCCCTCACCTCTATGGTCGTCACAAAGCCACAGGAAGATGAAGTGGAAGTTGCCGACAAACCCAAAGAGGGTGGAGAGGATCCTAGACCTCCAGCTCAAATGCCCATGATTCCATGGCAGAGTGAAACTGTTCCCTCTACTATGTCAGCAATCGGTTCCTGCTTTCTGCTGCTGGTCAGTCTAAGCCACTTTGTTTTGAAGTTCCTCTTCCTCACAAACTCAAACTGCTACAGGATTCTGCTTCAGAAGTGTGTCTTAGAGCTCTCTATGAATGGAGAATCCATGACTAGACAAAAGGGATTCATTAAAATTGCCTTTCATTACAAAACAAACCATCGCCTGACAATAAACACAAGTTCTATCAGATACCAGGATGGCCAGAATGATGAGTTTTTGTGGGGCCAGGAACCTACTCAACACAGTACAGAGGGCGTGTCTCTGATTCTACAGAGTAATGAAATGGATGTTACAATGGGAAATATACGCGTTGTTATTCTTCTTAACAAGAAAAATGGTGATGTGTTTCTGTGGCCTGCCGTTCGGCAACAGCCAAAAGATATCAGTTTGATGGGTATTTTAGATAAAATCTCAATAACTGTGGACAATATTGAAGGAAAAGCTGAGGCTTCATATGAGGAGATTCAAGGATCTCAAACACCAACTCTAAAGATAATGGACCAGGAAGTGAAGGCGAGCTGGGAGGATGTCACAGACTACACACTTCCTTCAACTCCAGTTATCAAATGTTGGCTTGTCCCGTTCCAGACTGTGATGCAGGGAGACATTTCTGATTTCACTGTCACTCAGCTGTAGAGTTCAAAGACAAATTATAAACTGGGATAGAGAATGTTTCTGTGTAAAACACTTGATGTTTGTTTTAAGTATTTTTTCAGTCATTGGCAATTGACTGTCTGTCTATGTATCTATCTATAAATTTTATGTATACATAAAGCAACCCTTTGATTGGTGCCTTTCTAAGTATTAATTGTAATTATTTCTGTAAAATATGTATTTTTTGAGGTCATGTCTGATA

Function

NR:

description
Zgc:112265 protein, partial

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09559074_09602026.mRNA True 7630 mRNA 0.43 55 9558978 9602246

Neighbor

gene id symbol gene type direction distance location
CI01000306_09548430_09553502 WNK2 coding upstream 5476 9548430 ~ 9553502 (+)
CI01000306_09536090_09548281 NA coding upstream 10697 9533915 ~ 9548281 (+)
CI01000306_09518431_09519858 CARD19 coding upstream 38258 9517962 ~ 9520720 (+)
CI01000306_09500798_09514840 BICD2 coding upstream 43657 9500475 ~ 9515321 (+)
CI01000306_09475675_09494799 TKTA coding upstream 63123 9475531 ~ 9495855 (+)
CI01000306_09625036_09626067 NA coding downstream 22714 9624960 ~ 9626941 (+)
CI01000306_09656951_09671072 NA coding downstream 53149 9655395 ~ 9671766 (+)
CI01000306_09674684_09680504 CRELD1 coding downstream 70529 9672775 ~ 9680673 (+)
CI01000306_09851578_09857742 HP1BP3 coding downstream 248981 9851227 ~ 9858552 (+)
CI01000306_09860935_09865155 SH2D5 coding downstream 258689 9860480 ~ 9865724 (+)
G435554 NA non-coding upstream 78885 9436545 ~ 9480093 (+)
CI01000306_09296908_09305617 NA non-coding upstream 252811 9296809 ~ 9306977 (+)
CI01000306_09263755_09288503 NA non-coding upstream 270416 9263589 ~ 9289035 (+)
CI01000306_09216004_09219290 NA non-coding upstream 303288 9215829 ~ 9219563 (+)
G435540 NA non-coding downstream 181 9602427 ~ 9603396 (+)
G435589 NA non-coding downstream 95183 9697429 ~ 9698325 (+)
G435590 NA non-coding downstream 102461 9704707 ~ 9737144 (+)
G435609 NA non-coding downstream 143588 9745834 ~ 9748829 (+)
CI01000306_09225597_09230504 NA other upstream 332472 9225512 ~ 9231333 (+)
G434545 NA other upstream 2439119 7119317 ~ 7119859 (+)
G433724 NA other upstream 3429200 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 3450803 6106143 ~ 6108175 (+)
G435639 NA other downstream 277674 9878664 ~ 9884919 (+)
CI01000306_09891658_09893015 SNRPE other downstream 289286 9891532 ~ 9893239 (+)
G436932 NA other downstream 1480742 11082988 ~ 11098376 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003624 itih3b coding NC_007122.7 CM002895.2 37178271 ~ 37200200 (+)