CI01000306_09625036_09626067


Basic Information

Item Value
gene id CI01000306_09625036_09626067
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9624960 ~ 9626941 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09625036_09626067.mRNA
GCATAAAAATAAAGCTTGTATTTAAGAACCAATTACACTCAAAATTAGATTGTTGTTAATTCTTAGACACTCCATTATGGTTAACGGGACTACTGATTCAAACAGTTCCAGTCTTGGACCGAGTGATGTCGAGCGAGTGTTGGTACCAATATTTGACAGCTTTATCCTGGTGACCGGGGTAGTGGGACACATCCTGGTTCTTATCATCATCTGTCGAACGATACGGCGAGGACGTGGACAGCCCAGTGGAGGAAGGACAGGAGGACTCCAACAGACAAATGCAAACGGCACAGATGTTTTTCTTCTGTCATTAAGTGTGGCGGACCTTCTCCTACTGTCATGTCTTCCATATCACACAGTTGCCATTGCAACCCATCACTGGCCGTTTGGAAGCTTTATGTGCAAGTCCGTCAGCTTCCTGAGTGCGATGTGTACAGCCGCCAGTGCCTTTACGCTGGCCGCTTTGGCTTTTGCTCGGTACATCATCGTAGTTCATCAGTCCAAAGCGTATCGATGGCGCAGAGAGGGGCGTTTAAAAGTGACTGCAGGCGTACTGTGGATACCAGCTGTTGTGTTGGCATCGCCTCAGTTCGCTTGGAGGACACTGATTTCAGGGCCGGACAACCGTGAAACTCTTGAGGACCTGGCATGTTTTAATTTCCTTTCTGACAAGAGCCAGTTGGCATATGGAGTGTGCCACTTCCTACTGGCTTTTGCATTTCCGCTTTTGGTCATTGTAATAGCCTATGCCAAGATATACCATTTCCTCAAAATCACCAGGCGGGATCGCACAACTCAGACTGACCGTTTGGAGCACTACCATGTTCATGTCACCCAGATGTCTGCTCTGTTAGTGCTGGCGTTTGCATTGTGCTGGCTGCCTTCCTATGGCTTGATGTTTGCTCAAATAGTTGAGGGTGACAATGCGGTTGGAACTTTACCTAACTTTGGACCCTTTGCTACGTTTGCTCGCATCATGGCAACCTCTTCTACAGTGGCCAACCCCATTCTCTATGTTTTCATGTCAGAGAAATTCAGGAAGGAACTAACAGATCTGGTTCGAGGAGGCTGTGGAAACAGACCCTCCGAAAGCCATATGGGATGCTGAAATGACCTTTTAAGAGTTACCAAATAACATGATTTATTCCATAAAATATGTTGTTTACATACTTAAATGACTGTGTACAGATGCTAACAATGTGTTTTGTTTTTTAAACAAATATGTAGAACATTTCCATAAGTGATGCCACAATGACCAATGGACAATGACCGCGTTAAGCCGCGTTTCCACCGAAACTACCCGGAAAAATTTGTCTGAGGAACTTTTTTCCCCCCAGACCTATTGCTAGCTGTGTTTCCATAGCGGTCTAAAGTACCGTGAAGATAGTCCGTTGACGTAGGACTGTGCGTGACTTTCCAGTTCCCGCTGGATTTCATCCTCCGCATATAAGTTTAATAAAGCCTGAACCTTGTCGTCAGTCCGTCGGTCGTATTTTTTAAACCCTATTGTTGATTCGAATAGCAGACAACTCTTACTGCACACACCGCAACAGACTTTAAAAAACGATGGTTGAAATAAAATGCTGCGTGGAGTCAACCAATCAAAATGCTGTGTGAACTCAACCAATCAGCATGTTCAGCGCCCAATCCCACCCCCGAAAGTTCCGGAACTTTGAAAAAGTACTACCCCACGAGCAAGTACGTTCAGAGGGGGAATTTTTTACCTGGAAATTCATTAGACCCTGGTTCCTGTGGTCGAAACACCGAGTACCACCCCAAAGTCCCTAGTTCCTGGGGAAAGGTCCTGCGGTGGAAACGCGGCTTAAGGAACTTTGGACTACCTCTTGAGTTAGCAATGGTGTTCTGGTATTTCAATGTAACCATTTTTTTGCAGAGCCTAGATTACAACAGTCTAGAATACATTGTTTATTCTTTTAATATTTTGTGTCAGTTAATTTGCAGACTTGTGAAGGTTTTGTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09625036_09626067.mRNA True 1982 mRNA 0.45 1 9624960 9626941

Neighbor

gene id symbol gene type direction distance location
CI01000306_09559074_09602026 NA coding upstream 22714 9558978 ~ 9602246 (+)
CI01000306_09548430_09553502 WNK2 coding upstream 71458 9548430 ~ 9553502 (+)
CI01000306_09536090_09548281 NA coding upstream 76679 9533915 ~ 9548281 (+)
CI01000306_09518431_09519858 CARD19 coding upstream 104240 9517962 ~ 9520720 (+)
CI01000306_09500798_09514840 BICD2 coding upstream 109639 9500475 ~ 9515321 (+)
CI01000306_09656951_09671072 NA coding downstream 28454 9655395 ~ 9671766 (+)
CI01000306_09674684_09680504 CRELD1 coding downstream 45834 9672775 ~ 9680673 (+)
CI01000306_09851578_09857742 HP1BP3 coding downstream 224286 9851227 ~ 9858552 (+)
CI01000306_09860935_09865155 SH2D5 coding downstream 233994 9860480 ~ 9865724 (+)
CI01000306_09866302_09875270 KIF17 coding downstream 239361 9866302 ~ 9875717 (+)
G435540 NA non-coding upstream 21564 9602427 ~ 9603396 (+)
G435554 NA non-coding upstream 144867 9436545 ~ 9480093 (+)
CI01000306_09296908_09305617 NA non-coding upstream 318793 9296809 ~ 9306977 (+)
CI01000306_09263755_09288503 NA non-coding upstream 336398 9263589 ~ 9289035 (+)
CI01000306_09216004_09219290 NA non-coding upstream 369270 9215829 ~ 9219563 (+)
G435589 NA non-coding downstream 70488 9697429 ~ 9698325 (+)
G435590 NA non-coding downstream 77766 9704707 ~ 9737144 (+)
G435609 NA non-coding downstream 118893 9745834 ~ 9748829 (+)
G435637 NA non-coding downstream 250699 9877640 ~ 9877881 (+)
CI01000306_09225597_09230504 NA other upstream 398454 9225512 ~ 9231333 (+)
G434545 NA other upstream 2505101 7119317 ~ 7119859 (+)
G433724 NA other upstream 3495182 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 3516785 6106143 ~ 6108175 (+)
G435639 NA other downstream 252979 9878664 ~ 9884919 (+)
CI01000306_09891658_09893015 SNRPE other downstream 264591 9891532 ~ 9893239 (+)
G436932 NA other downstream 1456047 11082988 ~ 11098376 (+)

Expression


Co-expression Network