CI01000306_09656951_09671072


Basic Information

Item Value
gene id CI01000306_09656951_09671072
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9655395 ~ 9671766 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09656951_09671072.mRNA
GTATATATGAGATATAACCCCTGTGACAACTAGCCCCAGCAATGCAGCTTCAGGTATGGGTGTTTTGGGGGTGTTGCTTTTTAAACATTGAGCCTTATTATCCCTGAATGAAGCATCTGGATGAACTCACTATGTTTCAGCCCGTTTTGGGTGTTTGCCGTCAGTTTTTAACTGAGACTCTTAAATCCAGGTGTGTTATTATAACCAGTTGCCAAGATACATGAGCTGCTAAACAAATTCACTTGGTTACAGAGAATGCGCCAGACAGACCTTTGCACCTGGCAGTTTCCTGGTTATAGTTTTACAAAACTGCAAATAACCAAGATCATATTTCTTATCTAGTATATCAGTCCTGTTAATTATGTGCACACCAACATCTTTTTACTACAGACGTTTTCTTCCACAAAGCCAATTTGCATGTGTGTGTGTGTGTCTCAGCTGGGAGGGGTGAGTGTCTCATGTACACTCAAAGTACACTCACACATTCTCATTTAATGAATGTGTGTCACTGGCAGCGAAGTCATATGACGAGGCATTATACTCAAAACACCTTATTCTAATTAGGACCTCTGGGCAGTAAGTAACTTTTTGCATTGTTTTGTGTTTTGTTTGTTTGTGAGCATTTTTTTTTCTTTTTTTTTTTTTTTGTCTGATAAAAATGTAATATTTTATCTTTTATTATCATTTGTATTACCATAAGCAACCATTATCAGCCTAGTATCAACACAGCATAACCAAAAAATCTCATATATTTTAAAATTCAGCGATATAATTATATACCAGTGGCATTAATAGTATTTAAACAAACAAATGGATATAGCTACAATATGTAGCTACAATACATATATTTATATATTTTTTATTATTTTGAAACCTAACATACTCCTTTTCATAAAATGTTTTGCTTGAAAGGTGTGTCTCTGCTATTTTTAAAATAAATGTTACTATTTTTATATTTTATCCAATGTAATGTTCTAAATTTGACGCGAGTGTCCAAATAATAACTATAACAAGTTAATGGCGTTACAACAAATGAGAACAATACGCATTGCCCTTTAAAACGTATCGGGAATCCAGACATTCCAAGCAGCAAACATGATTCATGAAACACCCACGTTATCCGGTGATCTGTCATTCACAGAGACACACCTGAGCATATACTGGAAGCCGAGTGTCTTCTTAGCGAACGCAGTTGTACTGAACTTCTGGGACTTGTGGCCGGTTGCATAAACTGCAACTGTCCCCAGAAGCTCAAATCAGATATTACAGGAGCTGAAGACTTTGAATCAAAGAATAATATGTCACTAATCGTTTTCTGTCGTCTTTCAGATAACCGGAACAGCATGCTGCGTAACTGCGCACTCTCGCGCTCCCTGCTCGGCGTGACTCGACTTCTGGACGGATGATTCGGACTGTGAACCGAACCGATCAGAACTATGGTCCTCTTGGATCCCTTAAAGCCTCATAGAGACGACGTAGCGAAAGATTGAATCAATGGGATTTTGTTCTTAACCAGTTTCGGTTAATCGTCTGTTGGAGAGCGAAACTGTTGCGCAATGGAGTTGACTTGGTGGAGATTTCAACTGCTCCTATTGGCCAGCGCCTGTGTGTGTTCACTGGAGCGAGTCGAACACAATCCAGAGAACAACATCATCTGTCCTCAGTCTCTTTCAAACTGCAGTTTGAGACATACAGAACCTCTCGGAGCACATGGTGTGGACTGTGGTCGTACGTATGTGTGTCGTCTGGAAGTGACGCCGAAATTGTGCTGTCACGGGAATGATTGTAAACCGTGCTTGTGGAGCAACATCCTTTTGAGTATTAATCCAGAGGAAGAGGAGGACAGTGATATTGAGGGACCAGAATATGAAGATGAGAACAGTGGAGAACGGGATTTAAGGTGTGTTTCAATGGCAAACAACACATCAGAAGATCAAAGGAAGGAACTCTGTGAAGACATACAGCAAGTTGCTATTACGATATGCTACATATCAGAAGTAAGGCATCAAGAGCGCTGCAGGAGATTAGACTTCACAATGACTTCTGCTGCAAGTCATGAACCTCTCAATCTGATTCTGGTGGAGTATGAAGATGTTGACTTTGGCAGAAAAATGGTGATCACAGTTAGATCGTCCTCTCAGTTATCTGTAGTTGACATCCCTACATTAAAACAAGTGTGTTCTTTACCACACCTCAAAGACATAAAGCAGTGTAAAGGTCCGAGAATCTCCATTAAGAGACTGGAGGGTGTGGTTAAGATTCTGGTAGCCAATGAGGATAAAGGATCTTCTGAACCCCCATCTCTGTGTATGAAACGTGGAAGAGAAGGAAGATGCTGGGTCAGTAAACCTTCACATTACTTCTGTGCGAATACGACACTGCCTGAAGACTCATTGCGATTACTATGCAAACCAGTTTGTTCATTTCATCAGCTGCCTTGTTTTGGTTACTTATCATACCTTTTCTTCTCTCAGCCATTGGCAAATAACAGCATTCCACTGGAGTCAATCACGGACTGCATGTGTTTCCAGGTTTGGACAGAAGATTCACCTCGTTCAGAATACTGTCCCTTTGAAAACAATAAAACAGAATTTAATGCCAATGTCCTGAGAAACATGTCAGTGTCTGTGGCCCACATCAAGACAAATAATGATCAGCCGGCGATGAGCTGGAATTTAACGGTACCCTGCAGGATAAGTGCTGAATTGTGGCCGTGTCAGCTCGAGGCAGATGGACAATGCAGAGAAATTAAAGGATTCAGACAACATGGGAATGATTGGGAAGAAAACAGTACAATACTATGGGCATCCGGGAAATTTGTGAATATCGCATCTCGGGATCACCAGCAGCTCTGTGTGAAGCTTAAAGTGGATGGAAAGATTGTGCTGTACTGTCAACATCCCTTGGAACGACAGTACTGGAGCCTTCTTGTTCTTCTACCAGTCATCCTTGTTTGTCTGACTATTTTTGGAGTACTTCTTCTGGTGAACAAACTGAAATCATCTCGTAGCAAATGGGACAGATGTCATTCTCAAGATATGAAGGGACAGGTGTTGTTGCTCCATTCCTCAGCCACTGACCCACAGTTGGTGTGTAAGCTGGGCCTGTTGCTTTCTGAGCTGGGTTACAGAGTATTTCTCGACCTGTGGAACCAAACAGAACTCGGTTCTCTCGGCCCGGCAGCGTGGCTCCACTCCAAGCTCGATCACATCCAGAAACATGGAGGCAAAGCTCTTCTTTTGCTTTCTCCATCAACACTACAGAGTGCAGAGTGCTACTGGAACATTGCAGTGGAAAGACAAGGCAATCTTGCCACATACTCCTCAGATACACTGGCTTCGGCCCTGACCTGCATTTTCGCTGACCGCCAGAAGGGCGGTACTGCTCAGCGGTTCATCCTCGTGCAGTTAGACTGTCATGAACTTCTCATTAAAGAGGAGCTGCCAGTGCTGCTCAGGGGCCTGCCGCGCTATAAACTGCCCTCGCAGTCTCAGGGATTACTTATGGAGCTGTGTTTGGAGAGCCCAAATAACGTGTGTGGAAAGTTGAAGAAGATGTGGTGGATAAAAAGGGCACGGAGGAAGCTGGCCAAAGGAGTGCAGAACATTTCTATTAGGACGAGGGTGAGGACTGAAACTATGCTCACTCAAAGTGATTCACTCAGCCTAGATACGGAAGACACAGAGGAAAGAGTTTTTCTTGAAATTGAACAGTACTAACATGTCATTTACTCTCTCATCACAGCAGAACATTGTTTAAAATACACAATCTGTCACTATGGACTATGGACAGACAAGTAACAGATGGTACCATGGTAATACCACGTCCATTAAAATTACCACGTCCTGTGCATATATGGAAATACTAAAGATCTTTAGACATGTGCCATAGGAGTACAATCACACCATGAAGTACCTTGGAGTACTAGGCTATGTAAATATGAAATGGCATAGATATTATATTTGCAATACCTGGCAATAACCTCAGGGGATGCTAAAGAAGGAAGTCTGCATGTCCAAGTACAAATGAGGAAATTTCAAAGTACAGACACTACAGGAAGTAAATGAAGAAATTAAATTGATAAATACACTGCAAACTCCAAGAGATCACTGTAGGCCTACATATACTGTACATATAAAAATATATATGTATATATGCGTATATTTTCATATTTGTAAAGATATTACTTCTAATTTATCCTTTTTATCTCAGCTCTAACTTGGTGGTTGTAAATATGCCTAATTCACTGGCTTTTGGCTAATATGCTACATAAATTTCATATGTAAACATGACTCATATTTTTTTTTTAATTGAACTTTTGTAATGTGCATTTTAAATGCTCTGGTTGTACTCAATTATACAGTTTATTGACACTTTTAGTGTTCTGTCATGGGCTGACATGAGTGGAATAGA

Function

NR:

description
interleukin 17 receptor C1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09656951_09671072.mRNA True 4413 mRNA 0.41 15 9655395 9671766

Neighbor

gene id symbol gene type direction distance location
CI01000306_09625036_09626067 NA coding upstream 28454 9624960 ~ 9626941 (+)
CI01000306_09559074_09602026 NA coding upstream 53149 9558978 ~ 9602246 (+)
CI01000306_09548430_09553502 WNK2 coding upstream 101893 9548430 ~ 9553502 (+)
CI01000306_09536090_09548281 NA coding upstream 107114 9533915 ~ 9548281 (+)
CI01000306_09518431_09519858 CARD19 coding upstream 134675 9517962 ~ 9520720 (+)
CI01000306_09674684_09680504 CRELD1 coding downstream 1009 9672775 ~ 9680673 (+)
CI01000306_09851578_09857742 HP1BP3 coding downstream 179461 9851227 ~ 9858552 (+)
CI01000306_09860935_09865155 SH2D5 coding downstream 189169 9860480 ~ 9865724 (+)
CI01000306_09866302_09875270 KIF17 coding downstream 194536 9866302 ~ 9875717 (+)
CI01000306_09891658_09893015 SNRPE coding downstream 219892 9891532 ~ 9893239 (+)
G435540 NA non-coding upstream 51999 9602427 ~ 9603396 (+)
G435554 NA non-coding upstream 175302 9436545 ~ 9480093 (+)
CI01000306_09296908_09305617 NA non-coding upstream 349228 9296809 ~ 9306977 (+)
CI01000306_09263755_09288503 NA non-coding upstream 366833 9263589 ~ 9289035 (+)
CI01000306_09248061_09260369 NA non-coding upstream 404862 9247797 ~ 9260408 (+)
G435589 NA non-coding downstream 25663 9697429 ~ 9698325 (+)
G435590 NA non-coding downstream 32941 9704707 ~ 9737144 (+)
G435609 NA non-coding downstream 74068 9745834 ~ 9748829 (+)
G435637 NA non-coding downstream 205874 9877640 ~ 9877881 (+)
CI01000306_09225597_09230504 NA other upstream 428889 9225512 ~ 9231333 (+)
G434545 NA other upstream 2535536 7119317 ~ 7119859 (+)
G433724 NA other upstream 3525617 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 3547220 6106143 ~ 6108175 (+)
G435639 NA other downstream 208154 9878664 ~ 9884919 (+)
G436932 NA other downstream 1411222 11082988 ~ 11098376 (+)

Expression


Co-expression Network