CI01000306_09674684_09680504 (CRELD1)


Basic Information

Item Value
gene id CI01000306_09674684_09680504
gene name CRELD1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9672775 ~ 9680673 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09674684_09680504.mRNA
ATATAAATGGGAATTTATACTTGTGTTTTGACAAATACTAATAAAATAAACTGAATTTAATAGAGTTAAACTAACTCAGTCTGAAAATAAACAAGAATGTTCAATGTACAGTAATAGAAATGTGAAATTAGAACATTTCCCTTAATTTAATTTAATTTTAATAAATGTAATCCTTGAAAGAATTTAAAGAAAACTAAACAATTATCTAAAAAAACAAGGTCTAAAATCATAATTGATAAAAGCAGTAGCCTGTTTAATTTAACAAAGTTCTTTGGACAAGGCTTAAGCCTAGTCCCAGACTAAAATGCATGTTTAAAATTTGTCACAGTACCATTGTTTTGTCTCAAGATGCATACCAGTAATGTTTTTTTTTCTAAGGCACATTTATAAAAGCTATTTAAAGGGATAGTTCACCCAAAAATGAAATTTCTGTCATTAAGTACTCACCCTCATGTCGTTCCAAACCCGTAAGACCATTGTTCATCTTCAGAACACAAATTAAGATATTTTTGATGAAATCCAATAGTTTTTTATCCCCATAGAAAGCAATGTAATTACTGTCATTCAAGGTCCAGAAAAGTAGGACAGACATTGTTAAAATAGTCAACGTGACTACAGTGGTTCAACCTTAATGTTATGTTGAGAAAAAATTGTTAATGTTGAGAAGAAATTGTTTTATAACGTCACTATTTTTGTTTTGTTTTTGCGCACAAAAAGTATTCTCATTGTATTCTCGATGGTGAGTACTTAATGACAGAAATTTCATTTTTGGGTGAATTTACCCCATTTTTGGGTGAACTTACCCTTTAAAGTCCCCCTGTAGTCAATAATTTTATCACTTAAAACTCATCTTTTATCACCAAAATTACATATTTAAATGTTTTTTTTCTTGTGAAAAAAAAAACAAAAAAAAAATCTTAATGTCTTAAAATAGCTTGAATGTAACTCTACACCCTTGCCTCATTTAATATGGATCTATGAATATGATAATTAGCCCCGCCTCCACTCACTTGCACGAGCTCAGACGAGATCCACTCGGCCAACTTACTGAGATAAACGCTGCATAATGGTATCGCTTTTTACAACGTTGGACACATAATGGTAATTAATAAGATTAGCGGATTGCTTGACTGCAATATCAAACAGCTAATAATGTGTTGCTAATGTTACACAAACCATGTTCACATTCACGAGTCAGACAGCTGCCTTCTAACAATTAATATTCTTAATAACGTTTTGAACAACTCAGAATGTCAATGGAGAAAGGCACATAGTTCATCATAACATTGTAATATGGATCATACACCCGCGATATTGCTAAATCTACCTGTTTTTCATATCAACAGAAAAATATACCGGGATAACCTTCTTTTGACTCACTTGCGTGGTCAGTTAATGATATGCTAAAGCCTGCCGGCACGTTGACAGTTACAAGGAAGTTTGTGATGTCAGAAATACCAGTGAATTCAGTGGTTTGAGACTGTCTTTGGTTTACTGCAGTTTTAAATAGAAAATACTCAGCAATGATGTTGAATAATAAATTTGCACATGGTTTGACTTAAAGCATATTAAAAACATAAACTTGATTTTCATCACAGGGGGAAATGTCCTAATTGAACTAAGGCCTAATCCTGGTTTAATCTAAGCCCTCTCTGTGAAACCAGGCCTATGAATTTTCAATAATATAACATACATAACAATTTAGTTGCTTCAGATAGAAGATCACACCTTAACATTGTTAAAAGTTCTTGTTGGTATTTGAAAATGAAATTAACTTTTTTGTCCTCAAGCAAATTCCTATTTTTAAAATCATCAGATGTCACGAGGAGTTTGAATTTTTCCATACCAGTTAGACTTTGTGGGGTTTCGAAGCACTCAACCGGAGGGTTGCACTAATGCGTGGAGAGTGATGTCACCCTCACGGATGTTCTTCCTGTCTGCTGTGCTCTGCGTTGCCCTTTTTCATCTCATTCTGGGTCAGAACTGCTCAGAGCACTGTAAAGCTTGTGGAGGGCCAGAGAAAGACCAATGTCTTCAGTGCCACACCGGATTCATCCTGCATGACAACTTGTGTGTGGATATTGATGAATGTGGTACTGATTTGGATCGCTGTCCCGACAACACGTACTGCTTGAACACTCATGGCTCTTATGACTGCAAAGAATGTGATAAGGCCTGTATTGGCTGTATGGGTGGAGGAGCTGCCCGCTGTAAGAAATGTGCTCCTGGTTTCAGATCTTCAGGCATGAGATGCATAGATATAGATGAGTGCGGTGAGGAGGTGTTGGCCTGTCCTGGTGTCAATGTGTTCTGTGTGAATACAGAGGGGTCTTTTCACTGTCAGTGCGCAGGCGGATACACACGCACGGGCAACACCTGTGAGAGGAGCCACATGACAGCTTCTGCAGATAAGGGTCTTTTTGATGACATTCAGGAGGATGAAATCGAGGTTCTGCAGCAGATGTTCTTCGGTGTTGTTCTGTGCGCCTTGGCCACGTTGGCGGCTAAAGGGGACTTGGTGTTCACCTCCATCTTTATGGGGGCAGTGGCGGCCATGGCTGGATACTGGCTCTCTGATAAGAGCGACCGAGTGATAGATGCCATCTTGAAGGGGAGATAAATACAAAAGGGGCTTGAAAAGTTATTTGCAGTGATGTTTTCTACAAAGTCTGCTGCTTTTTGAGTTGGGCCATTTCTTATACAGTAAAATGACTATATGTTGACATCTAAATGGCACAAGGAAGTCAAAATGCTTTATGAAGCTGCTTTAATCAACATCTTGCGTTAAA

Function

symbol description
creld1 Predicted to enable calcium ion binding activity and protein disulfide isomerase activity. Predicted to be an extracellular matrix structural constituent. Predicted to be involved in cardiac septum development and endocardial cushion development. Part of collagen-containing extracellular matrix. Implicated in atrioventricular septal defect and heart septal defect.

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09674684_09680504.mRNA True 2789 mRNA 0.37 5 9672775 9680673

Neighbor

gene id symbol gene type direction distance location
CI01000306_09656951_09671072 NA coding upstream 1009 9655395 ~ 9671766 (+)
CI01000306_09625036_09626067 NA coding upstream 45834 9624960 ~ 9626941 (+)
CI01000306_09559074_09602026 NA coding upstream 70529 9558978 ~ 9602246 (+)
CI01000306_09548430_09553502 WNK2 coding upstream 119273 9548430 ~ 9553502 (+)
CI01000306_09536090_09548281 NA coding upstream 124494 9533915 ~ 9548281 (+)
CI01000306_09851578_09857742 HP1BP3 coding downstream 170554 9851227 ~ 9858552 (+)
CI01000306_09860935_09865155 SH2D5 coding downstream 180262 9860480 ~ 9865724 (+)
CI01000306_09866302_09875270 KIF17 coding downstream 185629 9866302 ~ 9875717 (+)
CI01000306_09891658_09893015 SNRPE coding downstream 210985 9891532 ~ 9893239 (+)
CI01000306_09922070_09935786 SOX13 coding downstream 241397 9922070 ~ 9936407 (+)
G435540 NA non-coding upstream 69379 9602427 ~ 9603396 (+)
G435554 NA non-coding upstream 192682 9436545 ~ 9480093 (+)
CI01000306_09296908_09305617 NA non-coding upstream 366608 9296809 ~ 9306977 (+)
CI01000306_09263755_09288503 NA non-coding upstream 384213 9263589 ~ 9289035 (+)
CI01000306_09248061_09260369 NA non-coding upstream 422242 9247797 ~ 9260408 (+)
G435589 NA non-coding downstream 16756 9697429 ~ 9698325 (+)
G435590 NA non-coding downstream 24034 9704707 ~ 9737144 (+)
G435609 NA non-coding downstream 65161 9745834 ~ 9748829 (+)
G435637 NA non-coding downstream 196967 9877640 ~ 9877881 (+)
CI01000306_09225597_09230504 NA other upstream 446269 9225512 ~ 9231333 (+)
G434545 NA other upstream 2552916 7119317 ~ 7119859 (+)
G433724 NA other upstream 3542997 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 3564600 6106143 ~ 6108175 (+)
G435639 NA other downstream 199247 9878664 ~ 9884919 (+)
G436932 NA other downstream 1402315 11082988 ~ 11098376 (+)

Expression


Co-expression Network