CI01000306_09690177_09739046 (ERC2)


Basic Information

Item Value
gene id CI01000306_09690177_09739046
gene name ERC2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9689934 ~ 9739046 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09690177_09739046.mRNA
ATGGCGTGCTATATATGGTCTTTGGCCGGAAAGATGAGGGCCGGACATGTCCTTTCTCTGGCACGGAAGTGCACAGATGACCAGGCCATCTGCATACCGACTTTGTTTCAGCATAAATGTACATTTCTCACTCTCTCTCCTTCACACGCCCATGAATGCCCACACATCCTCACTTTTCATAGCGTGAAAACAGGCTCTTGGGAACCTTGGGAGATGTATGGCAGCGCACGCGCCGTCGGCCACATCGAGGGCAGCCCCGCTCGCTCCCCGCGGCTGCCCCGCTCTCCTCGGTTGGGCCATCGTCGAGCCAACAGTGGCAGTTCGGGCTGCAAGACCTTATCCATGGAGAACATCCAGTCCCTCAATGCTGCCTACGCCACATCTGGCCCAATGTACTTGAGCGACCATGAAGCCGTTGGCTCCACGGCTACTTACCCCAAAGGCACCATGACGCTCGGTCGGGCCACAAGTCGAGCGATGTATGGCGCTCGGGTCACGGCCATGGGCAGCACCCCTAACATCGCCACGGCAGGAATCCCACACGCCGACCTGCTGTCTTACGGTGACCTGGGCTCGCTGTCTATGCTCCACCACCAGGGGACGCCGTCTGCCCTGCTGCGACAGGCGGTCAGGGGCGGTGGCGGTGAACTTTTGGAGCTCCAGGCGCAGCTACGGGACATGCAGAGAGAAAACGATCTCCTTCGGAGGGAGCTGGACCTGAAGGACAGCAAGCTGGGCTCCTCCACCAACAGCATCAAGAGCTTCTGGAGCCCCGAGCTGAAGAAAGAACGTGTGATGAGGAAAGAGGAGGCAGCGCGCACGTCTATTCTCAAAGAACAGATGCGGGTGACCCATGAGGAGAATCAGCACCTCCAGTTGACCATTCAGGCCCTGCAGGACGAGCTGAGGACTCAACGCGACCTCAACCATCTTCTCCAGCAGGAGAGCGGGTCACGGGCCGGTGGGGGCGAGCACTTTACCACCATTGAGCTGACCGAAGAGAACTTCCGTCGGCTCCAAGCAGAACACGACCGTCAGGCCAAAGAGCTCTTCCTCCTGAGGAAAACGCTGGAGGAGATGGAGCTGAGGATCGAGACACAGAAACAGACACTGGGAGCCAGAGACGAGTCCATAAAGAAGCTTTTGGAGATGTTGCAGAGTAAAGGGCTTCCCCCAGCCTCAGGAAGGGCATCAGATGAGGAGGAGCAAGAGCGAGCCAGGCGTATTGCAGAAGCCGAAGCTCAGCTGGGCCACCTAGAGGTGATATTAGACCAGAAAGAGAAGGAAAACATCCATCTGAGAGAGGTATCAGGTTCTACTCAAACTTTTTGGGTTGAAAGTGGATTTTCAACCATGCATGTCACTCAGGAGCTTCATCGCAGAAACCAGCTTCACCCAGACCCTGGAAAAACTAAAGCTCTTCAGACTATTATAGAGATGAAGGACACCAAAATCGCATCCTTGGAGCGCAACATTCGGGATCTGGAGGATGAGATACAGATGTTGAAGGCGAATGGATTGCTGAACACAGAGGATCGAGAGGAGGAGATCAAACAGATGGAGGTCTACAAAAACCACTCCAAGTTCATGAAGACCAAGATTGACCAGCTCAAGCAGGAGCTCTCGAAAAAAGAATCTGAGCTTTTAGCTCTGCAAACAAAACTGGAAACTTTGAATAATCAGAATTCAGACTGCAAACAGCATATTGAAGTGCTCAAAGAGTCCCTCACTGCCAAAGAGCAACGCGCTGCCATCCTTCAAACAGAGGTGGACGCTCTTCGATTGCGTCTGGAGGAGAAGGAATCGTTCCTTAATAAGAAGACGAAGCAATTGCAAGACTTGACCGAGGAGAAGGGAACACTGGCTGGGGAAATCAGAGACATGAAAGACATGCTGGAAGTCAAAGAACGCAAGATCAACGTCCTGCAGAAGAAGATTGAAAACCTTCAGGAGCAGCTGAGGGATAAAGATAAACAGCTCGGGAATCTAAAGGACAGAGTGAAGTCTCTCCAGACGGACTCTAGCAACACCGATACTGCCCTCGCCACGCTAGAGGAAGCTCTGTCTGAGAAGGAGCGAATTATTGAGCGCCTGAAAGAGCAAAGAGAGAGGGAAGACCGAGAGAGACTAGAGGAGGTGGACTCATATAAAAAAGAGAATAAAGACCTGAAAGAAAAGGTGAACTCTTTACAGCTGGAGCTAACAGAGAAAGAGTCGAGTCTCATAGATTTAAAAGAACACGCCTCCTCACTGGCCTCATCGGGTCTCAAGAAAGACTCCAAACTCAAGTCTCTTGAGATCGCAATCGAGCAGAAGAAAGAGGAATGCAATAAATTGGAGACACAGTTACAAAAGAATTTTTCTTCATTCATTCATTTTGATTGGCTGTGGCTGTGTTTATTTAACTGGTTTCTATGGCGGTGCCTTCCCATGATCCCCATACAGAAGGCCCATGAGGTGGAGGTGCAGCAAAGCTCACGTGGGAACCCAGAGTATGTGGACCGGGTCAAACTTCTGGAGAAGGAGGTGTCCTTCTACAAAGAGGAGTCCAGCAAAGCCCAGAGCGAGGTCGAGAGGTTACTGGAGATTCTGAGAGAGGTGGAGACGGAGAAAAATGACAAGGATAAGAAGATCGCAGAACTGGAGAGCCCCCCTCCCCACGCTGCCCGCCCCTTGCCCCGCCCTGGTGGCAGAGCCCCCTCTGACCCTCCCCCCTCTGTGTCCGCTGCCCCCCAGCAGATTGGGGGCATGGTGTGGGACTTCCTGGGAAAGCAAACCAAGGATCAAAATAAAAAGGGCCCAGGCATCAAGCTTGGCCCTCAGATGGACAAGAAAGGGCCTGGGAACATCTTGCAAGACCAGCGCAAGGATAATCCAATGGACAACCCAAAGATGGAGGAGTTGATGAATGTTTTGGAGAAGACGAGGCAGGAGTTGGATGCCACCAAGCAGCGTCTGTCCTCCACCCAACAGTCTCTGGCTGAGAGAGACGGCCATCTGACCAATCTCCGACAGGAGCGCAGAAAACAGCTCGAGGAGATCTTAGAGATGAAACAACAGGCTCTGCTCGCTGCTATCAGTGAGAAGGATGCTAACATTGCTTTGCTGGAGCTGTCCTCCTCCAATAAGAAGAAGACACAAGAGGAAGTGCTGGCCCTGAAAAGAGAGAAGGACAGACTGATGCATCAGCTCAAACAACAGAGCTGCACATACATTGAAATTCTGTCTGATGCTGACAAGTCGATTTTCTCATTTTATGGCCAATAAATGTTAAATGGATGATGTTATAGATCTATACTTTAAAAAAGGCAAAGTATCACAATGTCAGATTGTTTTACCCCAATATCATGCAGCTTTAATATATAGTATAACCAATGGATTTCATTGATTTGTTACGTATTTTGTCGTACAGGGTTAAATATTTGCTGAAATCTATCTCTATCCCTTGCACAAGTTATCTAACTCTTAAAATAGCCAAAAACAATTAAATATCCAATATCAGGCAATAAA

Function

symbol description
erc2 Predicted to be a structural constituent of presynaptic active zone. Predicted to be involved in maintenance of presynaptic active zone structure; neuromuscular synaptic transmission; and regulation of synaptic plasticity. Predicted to be located in cytoplasm and presynaptic active zone. Predicted to be active in cytoskeleton of presynaptic active zone. Orthologous to human ERC2 (ELKS/RAB6-interacting/CAST family member 2).

GO:

id name namespace
GO:0048786 presynaptic active zone cellular_component

KEGG:

id description
K19878 ERC2, CAST; ELKS/RAB6-interacting/CAST family member 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09690177_09739046.mRNA True 3510 mRNA 0.51 16 9689934 9739046

Neighbor

gene id symbol gene type direction distance location
CI01000306_09628418_09641286 NA coding downstream 48648 9627821 ~ 9641286 (-)
CI01000306_09522093_09523814 NINJ1 coding downstream 164381 9522033 ~ 9525553 (-)
CI01000306_09381571_09461159 CACNA1DA, CACNA1D coding downstream 228361 9381187 ~ 9461573 (-)
CI01000306_09374084_09380300 NA coding downstream 309428 9373287 ~ 9380506 (-)
CI01000306_09309973_09348444 CACNA2D3 coding downstream 341490 9309973 ~ 9348444 (-)
CI01000306_09753380_09774568 NA coding upstream 13322 9752368 ~ 9774784 (-)
CI01000306_09801952_09806496 BSNB coding upstream 62901 9801947 ~ 9808800 (-)
CI01000306_09825468_09827244 NA coding upstream 85529 9824575 ~ 9827282 (-)
CI01000306_09879930_09884435 NA coding upstream 139648 9878694 ~ 9885270 (-)
CI01000306_09887420_09890429 YOD1 coding upstream 148094 9887140 ~ 9890429 (-)
G436445 NA non-coding downstream 1527 9679509 ~ 9688407 (-)
G436500 NA non-coding downstream 41154 9648484 ~ 9648780 (-)
G436480 NA non-coding downstream 63525 9625081 ~ 9626409 (-)
G436449 NA non-coding downstream 66543 9601349 ~ 9623391 (-)
G436437 NA non-coding downstream 77814 9601884 ~ 9612120 (-)
G436473 NA non-coding upstream 33142 9772188 ~ 9785527 (-)
G436631 NA non-coding upstream 115180 9854226 ~ 9854681 (-)
G436639 NA non-coding upstream 153134 9892180 ~ 9893208 (-)
G436664 NA non-coding upstream 155996 9895042 ~ 9895283 (-)
G436665 NA non-coding upstream 156472 9895518 ~ 9895742 (-)
G436446 NA other downstream 18158 9656279 ~ 9671776 (-)
G434338 NA other downstream 2822998 6866656 ~ 6866936 (-)
G434086 NA other downstream 3237683 6437406 ~ 6452251 (-)
G434016 NA other downstream 3328291 6355180 ~ 6361643 (-)
G433985 NA other downstream 3492724 6196107 ~ 6197210 (-)
G436626 NA other upstream 95979 9835025 ~ 9836323 (-)
G436643 NA other upstream 283102 10022148 ~ 10025375 (-)

Expression


Co-expression Network