CI01000306_10304503_10316470


Basic Information

Item Value
gene id CI01000306_10304503_10316470
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 10304245 ~ 10316678 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_10304503_10316470.mRNA
ATATAAAAGACACAGTCCTCCGCCACTGGGAAAGAAACAACGAGAAAAATGCATGCACGAATGAGCCAAAATGTTACAAAATCGAGCTCTAAACAAGAACATAAGGATGCCTGGCACATGCGTGAAGCCTAGAACTCAGTGTGCATGCAGCAGCCATCAGCAGGACGAATGGAAACCCACGTACCTCACTGGTCTTGCCATTTTGCAGGAATACTGTAGAGGTTAAAATTGTGAAAGAGCAAAAGAAAAGCAGGGAAAATGCAAACGAAATGTGCTATTTTAAAACACAAGGGTCTAAAGGTGACGTCGCAAAACCAACGCCCTTTCCCTGTGGTAAAAATTAAACAATGCGAGAGATATTCCTGCTCTACGAAGGAGCAGGATTTCTTCCTCTATATTCCCCTAGTCTTTCGCTGCAGACCCTGGAATCCTCTCTGCTCAGCAGTTATTGAAGTGAGGAGAGGGTATGTCTCCATGGCAACCAGACATCAGCCACCTGTTGGGGAAATCTGCTTTATGTTCTCGGATCCAAACGATAATACGACATGTCAGGTTGTGTCAGCTGCCACCACCCCGCCAGGACGTCAGAGGTGCGTGTTTGCATTGGCGCACACTCGTCGAAAAGCTGTCATCTCTTCTGGAGTCTGCAGAGAAGGATCAAAGCGGGAACAGGCAGCCAGCGAGAGAGGGAAGGAGAGAGAGAGTTTGGGGTGAACCAGAGGACGCAGCCTCTCCAGTTAAACAGGGTAACCCAGTTGCTGCCAGATTGAAGGAAATCTGCTTCTCTGTAAACAGATTCAATTAAGACATCAAACTTCAAACCGTACGATGAAAAAGAATGCCGATGAGAAAAAAGACGGGTACGGGGTCGAACTGCGTGCCTCTGCTGCTTTTCTCTGATTTAGAAACAGACTTCTTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_10304503_10316470.mRNA True 922 mRNA 0.47 4 10304245 10316678

Neighbor

gene id symbol gene type direction distance location
CI01000306_10241081_10252745 MFSD4A coding upstream 51381 10241081 ~ 10252864 (+)
CI01000306_10194611_10226157 CDK18 coding upstream 78079 10194238 ~ 10226166 (+)
CI01000306_10190981_10191175 NA coding upstream 113050 10190981 ~ 10191195 (+)
CI01000306_10109047_10115899 NA coding upstream 188173 10107635 ~ 10116072 (+)
CI01000306_10078014_10104625 NA coding upstream 199098 10077556 ~ 10105147 (+)
CI01000306_10332743_10335743 NA coding downstream 15983 10332661 ~ 10335849 (+)
CI01000306_10347562_10355420 NA coding downstream 29673 10346351 ~ 10355457 (+)
CI01000306_10429251_10466444 EPHA8 coding downstream 112573 10429251 ~ 10466851 (+)
CI01000306_10548464_10549530 C21H1ORF50, CLG25H1ORF50, CUNH1ORF50 coding downstream 231786 10548464 ~ 10549627 (+)
CI01000306_10564069_10568262 CDC42P6, CDC42.L, CDC42L, BRAFLDRAFT_122664, CDC42 coding downstream 246162 10562840 ~ 10568557 (+)
G435767 NA non-coding upstream 17753 10283638 ~ 10286492 (+)
G435764 NA non-coding upstream 43153 10256921 ~ 10261092 (+)
G435753 NA non-coding upstream 165067 10138919 ~ 10139178 (+)
G435750 NA non-coding upstream 168942 10134983 ~ 10135303 (+)
G435702 NA non-coding upstream 173365 10053714 ~ 10130880 (+)
G435878 NA non-coding downstream 196072 10512750 ~ 10527209 (+)
G435889 NA non-coding downstream 290186 10606864 ~ 10607159 (+)
G436913 NA non-coding downstream 360687 10677365 ~ 10677606 (+)
G436973 NA non-coding downstream 413450 10730128 ~ 10730492 (+)
CI01000306_10738169_10739341 SVBP non-coding downstream 420648 10738169 ~ 10741047 (+)
CI01000306_09891658_09893015 SNRPE other upstream 411006 9891532 ~ 9893239 (+)
G435639 NA other upstream 419326 9878664 ~ 9884919 (+)
CI01000306_09860935_09865155 SH2D5 other upstream 441056 9860480 ~ 9865724 (+)
G435590 NA other upstream 567101 9704707 ~ 9737144 (+)
CI01000306_09263755_09288503 NA other upstream 1018916 9263589 ~ 9289035 (+)
G436932 NA other downstream 766310 11082988 ~ 11098376 (+)
G437030 NA other downstream 953080 11269758 ~ 11271160 (+)

Expression


Co-expression Network