CI01000306_10332743_10335743


Basic Information

Item Value
gene id CI01000306_10332743_10335743
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 10332661 ~ 10335849 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_10332743_10335743.mRNA
TTATATAAAGAAAGCCAGTCAACTTTTTTCCAGATGCATGTCTCATAATAAATTCCTGCGGCCTTTTGGGCTTTTCTGACCAATGTACCCTTTCTCTCCGAACACAGGTGGGGCAACGAGGCAAATTCCCCTTCTCTCACCAAACACAGGTGGGGCAAAGAGACCAATCCTCCAGCGACAAGAGGGCCTGTCGGTCTGGGAACGAGTGTCCGTGCCATACTTGAGCTTTCTCAGGCTGTCGGGACCACCGGCCTCACACAAGGGAGCTATTATGAACGTTACCTGCTTTCCAGTACCCAGAGGCTCAGTTCAAAGGGTCTTGAGATGGACTTTCAAGCCCAGTGGGGAAGTGTCACCCTACACCGCTGTGAACAGAGCACGGGTTTTGATGATCCGAGGGGGAAGTATCAATGGGACGCACAGCAGCTGTAAATGTGCACTCACCGCCCAAACGACAACGCCGGGTGCTAGAGACCTCTGTCCTTCAAGTCTACAGCAGCAAGATAAGATGACGACCGCCTGCAAATCCAACTGCCGGTAACTAGGTGTGAAACCTTCCTTGTGCTCTTGAGCAGTCTATTTCTGACTTAATAGAAGATAGGTATTGTTTAATGTCCTTCTCATCTAAAATGTTTTGGAGCTGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_10332743_10335743.mRNA True 647 mRNA 0.49 3 10332661 10335849

Neighbor

gene id symbol gene type direction distance location
CI01000306_10304503_10316470 NA coding upstream 15983 10304245 ~ 10316678 (+)
CI01000306_10241081_10252745 MFSD4A coding upstream 79797 10241081 ~ 10252864 (+)
CI01000306_10194611_10226157 CDK18 coding upstream 106495 10194238 ~ 10226166 (+)
CI01000306_10190981_10191175 NA coding upstream 141466 10190981 ~ 10191195 (+)
CI01000306_10109047_10115899 NA coding upstream 216589 10107635 ~ 10116072 (+)
CI01000306_10347562_10355420 NA coding downstream 10502 10346351 ~ 10355457 (+)
CI01000306_10429251_10466444 EPHA8 coding downstream 93402 10429251 ~ 10466851 (+)
CI01000306_10548464_10549530 C21H1ORF50, CLG25H1ORF50, CUNH1ORF50 coding downstream 212615 10548464 ~ 10549627 (+)
CI01000306_10564069_10568262 CDC42P6, CDC42.L, CDC42L, BRAFLDRAFT_122664, CDC42 coding downstream 226991 10562840 ~ 10568557 (+)
CI01000306_10738169_10739341 SVBP coding downstream 402320 10738169 ~ 10741047 (+)
G435767 NA non-coding upstream 46169 10283638 ~ 10286492 (+)
G435764 NA non-coding upstream 71569 10256921 ~ 10261092 (+)
G435753 NA non-coding upstream 193483 10138919 ~ 10139178 (+)
G435750 NA non-coding upstream 197358 10134983 ~ 10135303 (+)
G435746 NA non-coding upstream 207410 10122964 ~ 10125251 (+)
G435878 NA non-coding downstream 176901 10512750 ~ 10527209 (+)
G435889 NA non-coding downstream 271015 10606864 ~ 10607159 (+)
G436913 NA non-coding downstream 341516 10677365 ~ 10677606 (+)
G436973 NA non-coding downstream 394279 10730128 ~ 10730492 (+)
CI01000306_09891658_09893015 SNRPE other upstream 439422 9891532 ~ 9893239 (+)
G435639 NA other upstream 447742 9878664 ~ 9884919 (+)
CI01000306_09860935_09865155 SH2D5 other upstream 469472 9860480 ~ 9865724 (+)
G435590 NA other upstream 595517 9704707 ~ 9737144 (+)
CI01000306_09263755_09288503 NA other upstream 1047332 9263589 ~ 9289035 (+)
G436932 NA other downstream 747139 11082988 ~ 11098376 (+)
G437030 NA other downstream 933909 11269758 ~ 11271160 (+)

Expression


Co-expression Network