G430036


Basic Information

Item Value
gene id G430036
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 25238 ~ 69472 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU493796
GGAGAAACCAAACAGAGAAACTGAGAAATGCAGAAAAGCAAAAATTCCAGAGTTTTCAAGTCAGAAAACAGATTTCAAGTGTTTGAGTCGTTACACACAGTGACACACACTGCATTAAATGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTTTTTGTAACATATCAGGACACAAATTTGTATAATGATATAGGTATGACATAGGTATTACAAGGAGAGGGTGACTTATGAGGACATTACCCCATGTCCCCATTTTTCAAAAGGGTTATAAATCATACAGAATGAGTTTTTGTGAGAAAGTAAAAATGTGCACAGTTTCCTGTGATGGGTAGGGGTAGTGTAGGGGGATAGAAAATACGGTTTGTACAGTATAAAAACCATTACGTCTATGGAATGTCCCCACAATTCACAAAAACAAACGTGT
>TU493794
TTTTTGTGACATATCAGGACACAAATTTGTATAATGACATAGGTATGACATAGGTATTACAAGGAGAGGGTGACTTATGAGGACATTACTCCATGTCCCCATTTTTCAAAAGGCTTATAAATCATACAGAATGAGTTTTTGTGAGAAAGTAAAACTGTGCACAGTTTCCTGTGATGGGTAGGTTTAGGGGTAGTGTAGGGGGATAGAAAATACGGTTTGTACAGTATAAAAACCATTACGTCTATGGAATGTCCCCACAATTCACAAAAACAAACGTGT

Function

GO:

id name namespace
GO:0016071 mRNA metabolic process biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0006397 mRNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0016607 nuclear speck cellular_component
GO:0005681 spliceosomal complex cellular_component
GO:0005685 U1 snRNP cellular_component

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU493796 True 92 lncRNA 0.38 1 69381 69472
TU493794 False 279 lncRNA 0.37 2 25238 69472

Expression


Co-expression Network