G430270


Basic Information

Item Value
gene id G430270
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 214061 ~ 214314 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU494043
TGGCAGGATATAAACACTACAGATCTCCGTCCAACACTGACGGACCAGTTCAGTTTCTCATTCATGATTCGGGCTGAAACTGTAGCGAACGCCGATCGAACATGATGAGAGACAGACGTGTTCTGCTGCACATACTCATGTGTGTAATGATGAGAGGAAATGATGTCATGCTGCTACAATGAGTCCTGCAACAACAGATGAACACGCATGCTGCGCTTCACATACAATCGGATTAAAACACACTAAAATTAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494043 True 254 lncRNA 0.44 1 214061 214314

Neighbor

gene id symbol gene type direction distance location
CI01000306_00135679_00139917 NA coding upstream 73607 135500 ~ 140454 (+)
CI01000306_00107710_00118177 NA coding upstream 95101 106737 ~ 118960 (+)
CI01000306_00044391_00064128 NA coding upstream 149909 43677 ~ 64152 (+)
CI01000306_00235686_00242814 NA coding downstream 21133 235447 ~ 242861 (+)
CI01000306_00245734_00262949 LOXL4 coding downstream 30827 245141 ~ 263251 (+)
CI01000306_00279658_00285330 ERO1B coding downstream 65344 279658 ~ 285494 (+)
CI01000306_00285981_00288513 NA coding downstream 71515 285829 ~ 288715 (+)
CI01000306_00297906_00319127 NA coding downstream 83592 297906 ~ 319419 (+)
G430269 NA non-coding upstream 416 213332 ~ 213645 (+)
G430268 NA non-coding upstream 1708 212122 ~ 212353 (+)
G430245 NA non-coding upstream 47686 155063 ~ 166375 (+)
G430271 NA non-coding downstream 3275 217589 ~ 217842 (+)
G430272 NA non-coding downstream 3573 217887 ~ 229552 (+)
G430283 NA non-coding downstream 16505 230819 ~ 231095 (+)
G430207 NA non-coding downstream 53461 267775 ~ 337110 (+)
G430297 NA non-coding downstream 53928 268242 ~ 268866 (+)
G430409 NA other downstream 711230 925544 ~ 999902 (+)
G430452 NA other downstream 936283 1150597 ~ 1150938 (+)
CI01000306_01209847_01210850 ACYP2 other downstream 995419 1209395 ~ 1211232 (+)
G430719 NA other downstream 1934068 2148382 ~ 2150954 (+)

Expression


Co-expression Network