G430271


Basic Information

Item Value
gene id G430271
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 217589 ~ 217842 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU494044
AGATTCTCCAGCTTTGTTGTTGTTGAGCTTTTAAAGCTCCGCCCTCTTCTGGAAAGGGGGCGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACACAAAAACGGCGTGTTTTTGCTCACACCCAAATAGGGGCAAATTTGACAAGCTATAATAAATGATCTGTGGGGGATTTTGAGCTGAAACTTCACAGACACATTCTGGGGACACCAGAGACTGATATTACATCTTGTGAAAGGAGCATTATAGGTCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494044 True 254 lncRNA 0.45 1 217589 217842

Neighbor

gene id symbol gene type direction distance location
CI01000306_00135679_00139917 NA coding upstream 77135 135500 ~ 140454 (+)
CI01000306_00107710_00118177 NA coding upstream 98629 106737 ~ 118960 (+)
CI01000306_00044391_00064128 NA coding upstream 153437 43677 ~ 64152 (+)
CI01000306_00235686_00242814 NA coding downstream 17605 235447 ~ 242861 (+)
CI01000306_00245734_00262949 LOXL4 coding downstream 27299 245141 ~ 263251 (+)
CI01000306_00279658_00285330 ERO1B coding downstream 61816 279658 ~ 285494 (+)
CI01000306_00285981_00288513 NA coding downstream 67987 285829 ~ 288715 (+)
CI01000306_00297906_00319127 NA coding downstream 80064 297906 ~ 319419 (+)
G430270 NA non-coding upstream 3275 214061 ~ 214314 (+)
G430269 NA non-coding upstream 3944 213332 ~ 213645 (+)
G430268 NA non-coding upstream 5236 212122 ~ 212353 (+)
G430245 NA non-coding upstream 51214 155063 ~ 166375 (+)
G430272 NA non-coding downstream 45 217887 ~ 229552 (+)
G430283 NA non-coding downstream 12977 230819 ~ 231095 (+)
G430207 NA non-coding downstream 49933 267775 ~ 337110 (+)
G430297 NA non-coding downstream 50400 268242 ~ 268866 (+)
CI01000306_00344942_00353683 NA non-coding downstream 135634 344547 ~ 354116 (+)
G430409 NA other downstream 707702 925544 ~ 999902 (+)
G430452 NA other downstream 932755 1150597 ~ 1150938 (+)
CI01000306_01209847_01210850 ACYP2 other downstream 991891 1209395 ~ 1211232 (+)
G430719 NA other downstream 1930540 2148382 ~ 2150954 (+)

Expression


Co-expression Network