G431568


Basic Information

Item Value
gene id G431568
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 520960 ~ 521551 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU495500
CAGAAACAAGCTTCCATACTGATATGAAGTCAAAGCAGCTTTCAGACTGATGTGTGCAGTGGTCTTTAGAAACTAACAGTACACCCTAAAACCATATTTACTCAGTTATTGTGTCGAAGAGCTGCTTTCTGCGTCCCCCAGCATGCTCTCGTGAAGATAAACATAGTCTACCAGCACATGACTGCAGTGAACGTGTGCGTCTCTGAACGGGTTTAGCCGGATCTCAAACTCTCAGCATGTGGAGTTGATCCTGGAACGGTTCTGAAGAAACTGAGCACGTGTTCAGCGCAGCGTGTGTCGGGTTGAGCTGCAGATAAGGCCTCATGTCTTAAAGCTAAAGCTGAAGGCTGAGCCTGAATTTGACCCCCACACACATTAGAAGATTAACCTTTGTGTACCGTTTCAATGACACAATCCCTTCCTGGGACTGCGAGGAAGCTTTGATTATTTATTATTTTAACCATATTTTAGTGCGCCTGTATTCAGTTTGACAGTTTTCCAGTCGTTTATTCATGCACAGCATCGTTGTGTTTTGATGCGAGCGCATGTAATATGAACACACTCTCTCGGGACACACGGCAGCTTCTCATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU495500 True 592 lncRNA 0.45 1 520960 521551

Neighbor

gene id symbol gene type direction distance location
CI01000306_00509647_00514228 LDB1B, LDB1, XLDB1, LDB1.L coding downstream 6732 509294 ~ 514228 (-)
CI01000306_00498705_00504548 ORC2 coding downstream 16412 498484 ~ 504548 (-)
CI01000306_00482506_00494090 PFKLB, PFKL coding downstream 26870 482482 ~ 494090 (-)
CI01000306_00474870_00478789 BRAFLDRAFT_123431, GM5580, IF4A3, GM8994, EIF4A3.L, EIF4A3 coding downstream 42045 474764 ~ 478915 (-)
CI01000306_00466878_00474566 NA coding downstream 46394 466713 ~ 474566 (-)
CI01000306_00554763_00557805 CANT1B, CANT1 coding upstream 32888 554439 ~ 558193 (-)
CI01000306_00563449_00566897 NA coding upstream 41379 562930 ~ 566897 (-)
CI01000306_00566977_00570868 NA coding upstream 45426 566977 ~ 571035 (-)
CI01000306_00575882_00583996 SYNGR2B coding upstream 54142 575693 ~ 584438 (-)
CI01000306_00588975_00600403 NA coding upstream 67411 588962 ~ 601346 (-)
G431556 NA non-coding downstream 102918 417797 ~ 418042 (-)
G431551 NA non-coding downstream 110245 410428 ~ 410715 (-)
G431550 NA non-coding downstream 111238 409457 ~ 409722 (-)
G431546 NA non-coding downstream 117401 403217 ~ 403559 (-)
G431505 NA non-coding downstream 335390 184011 ~ 185570 (-)
G431475 NA non-coding upstream 138493 660044 ~ 661145 (-)
G431576 NA non-coding upstream 178368 699919 ~ 700243 (-)
G431486 NA non-coding upstream 191356 712907 ~ 714529 (-)
G431618 NA non-coding upstream 262416 783967 ~ 785240 (-)
G431611 NA non-coding upstream 335577 857128 ~ 868493 (-)
G431706 NA other upstream 641476 1163027 ~ 1163338 (-)
G431814 NA other upstream 790151 1311702 ~ 1312434 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other upstream 1196382 1717933 ~ 1726043 (-)
G432022 NA other upstream 2478685 3000236 ~ 3003891 (-)
CI01000306_04544349_04545034 NA other upstream 4021172 4542723 ~ 4545244 (-)

Expression


Co-expression Network