Gene
RNA
| Item | Value |
|---|---|
| gene id | G430389 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 907323 ~ 913761 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU494180 | True | 624 | lncRNA | 0.45 | 2 | 907323 | 913761 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_00887579_00889885 | NA | coding | upstream | 16615 | 887190 ~ 890708 (+) |
| CI01000306_00730637_00781399 | CLASP1 | coding | upstream | 125924 | 730637 ~ 781399 (+) |
| CI01000306_00705287_00711760 | CLCN4 | coding | upstream | 194738 | 705287 ~ 714524 (+) |
| CI01000306_00693218_00693943 | NA | coding | upstream | 212764 | 693218 ~ 694559 (+) |
| CI01000306_00681384_00689565 | NA | coding | upstream | 217511 | 681384 ~ 689812 (+) |
| CI01000306_01008614_01011977 | RALB.S, RALBA, RALBB, RALB.L, RALB | coding | downstream | 94853 | 1008614 ~ 1011977 (+) |
| CI01000306_01047698_01080329 | TMEM63A, TMEM63B | coding | downstream | 133937 | 1047698 ~ 1082259 (+) |
| CI01000306_01209847_01210850 | ACYP2 | coding | downstream | 295634 | 1209395 ~ 1211232 (+) |
| CI01000306_01224349_01255175 | NA | coding | downstream | 310389 | 1224150 ~ 1255472 (+) |
| CI01000306_01278230_01279369 | NA | coding | downstream | 364469 | 1278230 ~ 1279484 (+) |
| G430344 | NA | non-coding | upstream | 100571 | 806517 ~ 806752 (+) |
| G430335 | NA | non-coding | upstream | 177082 | 729903 ~ 730241 (+) |
| G430331 | NA | non-coding | upstream | 205129 | 701983 ~ 702194 (+) |
| G430170 | NA | non-coding | upstream | 294732 | 608747 ~ 612591 (+) |
| G430419 | NA | non-coding | downstream | 70754 | 984515 ~ 984938 (+) |
| G430400 | NA | non-coding | downstream | 89097 | 1002858 ~ 1026103 (+) |
| G430425 | NA | non-coding | downstream | 119459 | 1033220 ~ 1045108 (+) |
| G430433 | NA | non-coding | downstream | 156607 | 1070368 ~ 1071227 (+) |
| G430397 | NA | non-coding | downstream | 168767 | 1082528 ~ 1084265 (+) |
| CI01000306_00235686_00242814 | NA | other | upstream | 669954 | 235447 ~ 242861 (+) |
| G430409 | NA | other | downstream | 11783 | 925544 ~ 999902 (+) |
| G430452 | NA | other | downstream | 236836 | 1150597 ~ 1150938 (+) |
| G430719 | NA | other | downstream | 1234621 | 2148382 ~ 2150954 (+) |
| CI01000306_02974291_02976718 | TP53INP2 | other | downstream | 2059395 | 2973156 ~ 2979157 (+) |
