G431662


Basic Information

Item Value
gene id G431662
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 968276 ~ 1061413 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU495634
CACACAATCATGAACATGGTGTGAAATTATTGAAATATTTTCTTAAAAATTTTAAGTTAATATTTTAGGTCAAAGGGTTTTTTTTGAGAACATTTGAGAAACCCTGATATATAGAGCATGTGATACAGATCTAGTGCTGCATATTCTGCTTACTAAACTCACATTAGAGCCAGAGAATCACTTACTTTATTCTGAATATGGCCGTCAACCAGGAGCAGAAGCCCTGCAATGAGAACAAGAGTTCTGTCACACACACATAATGCAGTACACACAACAATAAACAGACTATTACTGCATATATTAATACAAGTCATGTGATTTATGGCTGCAACACATCCGCCCGGCCTGTGAAAGACTGTGAGGGAGATTTCTCAGCAGGATTACAGGTGAACGCAGGTGAAGAGGCAGGAGATGCTGAAGTCCTGCACTGATCTCTTAAGAGGCTGGAAAACAGGTGGGTGTTTCGGTGGGTGATGTCACCTGCTGAAAACTTGCTGGAGGCGCGTCACCATCACGGATTAACAACGGAAGACCACTAAGTAGGGATGCTCCAAAAATCGGTGTCATTATCGACCATCGATTCCATTTTTATGACTAGATTCTCCACATCGCAGAATTCAAATCGCCCCCTGCGGTTTCACTTTAAGGGAGTTTATTTGGAGGTTTTGTCGAGTCAGTTTCTCTCCTGAAGGCTTCTGGGGACTTTCAAGGACGGCGTCTGAAACGAGTGCAGAAACGCTGGTTCATCATGACTGTGATTTAAACAGAAATGATGGAGGGAGGAAGTTTTCACCCTCTATAAAGGCCGCTCGGTTCTTTCCGAGCGTATATAACGTTGACGTGAGGTCAGTGTTGCATGGAAAAATCAATGATGTCCGCGGGGAGCGAGAGGGGCCGGGAGACGCGCTTTGGGAAATGGGTAATAAAGACTTTGAGTTGGATCCAAAGTCAAATTGCCAACAAATCGTCTTTAAGTAGCTTTTTAAACTTGGCTTTGCTTCCAGATAAAGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAACACTGTGCAAAAAAACCCCATCACAATCAGAGATTACTGCCAATCCTGAATTATTAATCACACACAGTCATGTGACCAGCCAAACAGCTGTGGATGCAGATGAGAGGGGAGGGCGGGGCCAGAGGGAGTGATTGACAGGTGTCTTACGTTATCTCGCTGTTCGAAATCCACCGAGCTGGAGACGGAGGTGAGACGTTCATAACGGTCCGGCGTTTCAGAATGTAGAGCTGAAGCCACACTGCGCACACACACACACACAGAGAGAGAGAAAGACAGAAAGCAGAAGGAAAAAGAGAAAGAATAAAGTGAGAAACATGTCAGAAATTCAGGTTCAGGTCTTCTGAAGGGTTAAACTGGTTGTTTTTTGTTATTCTGAAGGCCTGAAATGAACCGAGCGCAGCCGGACAGTCAGAACATTCAGGTCCACACAAGCAAATATAGGTCAGTCTCATCTCGGGGTTGATGGGATATTAAGTATTTATGTGCTTGAGGAACTGAGAATACATCTGTAAAGCACATTCCCCTCCGTACGCTGAAAGATATTAACCCACAGTTCAGACGAAGACTAATCTACTCCCAAAACACACCGAAGAACAAATACAGATCTAAACAATCCTGACAGGAAGACGCTCGTGGTTTTTACAGCCTCCTAAAACTGAGTGTTTAGCAGATACAGACACTGAGGGATCTGTGAACCTCATTTCCACTAACCTGAGAACTGAACAATTCTCAAAAACTGTTTTATTGGGTCATTGACGAATAAGGTTTTTAAAAACGTAATGGAGATTTAATTAATTTTTAAGTTTTATTAAGTGTTAACACTGAGATTATGGGGTTTTTATAATCAATTAACACTGATTTTGTCATTTTTTACAAGAATTTGTCACCAAAAACAGTCATTCGGTTTAACCAAAATTTCGGTTTTACCGAATGACACTTTTGGTTATACTGAATGATGATATTTTCAAACAATGCTAACAGGCTGATATCTAGCTAGCTAGCAAAAGGACAATCAAACATTTTATATTTAGTACAAGTTTTTAAAATATTACAAAATTTTCCATGTTTTATAGCGGTTGTACCGAATGACCTGATGTTTCAGGACATGCGTATGATCAAGTGAAAACATGAAGTTTTTAAATAGTTAAGAGAGATTTAGTTACTTTGCTTCATGAGCATGTGGCCCTTTGCAGGTGTCTGAATGATGTCACATGATATTGACCACATGATCCAAAATGGTCCCTTTATATTGGTTACTCCGAATGAAATTCATTTTCCGGACATTCTTTCTCATAACAAAGCAGCGACTTCTAAACATAATTTTAATACCATTTTGCACTATGTTGATATATGATGTTATAAAATCATGCCAGAATAAAAAATATATACATTTATTACATTTTAAGATATTTTAAATCACTAAAACATGAAATGGCTGTGTTGGTCGGTTAAACCGAATGACCTTTTGACTCTTCAAAATCTTTAAAATCCCTTTATATGTAGCAAAATATAATTAAAACCTTTTGGATTCAATAAAAGAGATCTAGCTGTACTACCTTACATACTTTGGATGTCATATCTTTGTTTTTATTATTATTATTATTATTATTATGGCCTTTGGACAAGAAAATGACCCGTCACGTCATTGACCCATTTCTTTATTTATGCTCGTTACAGCATCACTAACGGGCTCTGATGAACTGTACTTGATGAGGACATGATCTCTGATGTTAATTTAAAGAGCCGGATCCTCTTTTTCCCTGGTCTGTGCACTGGCACAGTTCGTAAAAAAGGATTCTGTCACATGACTTTATTAACGTGGTTCCTCTGCTGTGGGTCTTGATGACTGACAGACTCAGACTAACGGCAGAAAACGGATCTGTGCATGAGGGACGCAGGAATCTTCCTCTCTCGGTTTATCTGAAGCAGGAGCTCTGGTGCGTCTCAAATGAAGTGATAAGAACAGAGGTTCAAACGGGCCAGAATTAAAATTTAAAAAATGAATTGGGCATTTCCTGAGCTCAGCATTGTGTAGCGGTGTTATTGTAATATACTGAACTGGATCCAAGATCTATTTCTACGCTTGCTTGCTTTCATTATGACCTGTCAATCAAATCAATCAATAAGACAGCAGTGTTTGTGTGGCAAAAAACTCTGCTGAGGCCATAAATGGACTCGAAACGTTATATAGTTTGTGATTTATACTGTATATATTGTGTTCAAACTTAATTTTTTATTCACTCTTATGTTACTCCAAACCAAACCCATATGACTATTTTTCTTCTGTGATGCAGAAAAGTAGATGTTTACCAGAATGTTCATGCTCATTTCCATAAAATAAATAAATAAATAAAAAATAAAAGTAGTCCATTTTTTTGTCCTTTTTTATTTTATTTTATTTATAAAGTGAATATAAAAATATTGAATTAAAAAAATGATTCATAATTTATTTAAAATATAATTATTTTTTTTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU495634 True 3520 lncRNA 0.38 2 968276 1061413

Neighbor

gene id symbol gene type direction distance location
CI01000306_00896923_00897303 NA coding downstream 70632 895082 ~ 898523 (-)
CI01000306_00879678_00883167 NA coding downstream 85094 879503 ~ 883182 (-)
CI01000306_00815374_00840697 NA coding downstream 127579 814998 ~ 840697 (-)
CI01000306_00717778_00722360 NA coding downstream 245916 717619 ~ 722360 (-)
CI01000306_00701052_00701714 NA coding downstream 266562 700937 ~ 701714 (-)
CI01000306_01086915_01093095 SLC29A1B coding upstream 25355 1086768 ~ 1093101 (-)
CI01000306_01109880_01112379 VIPB coding upstream 48366 1109779 ~ 1112803 (-)
CI01000306_01120958_01127237 SULT6B1 coding upstream 59403 1120816 ~ 1127560 (-)
CI01000306_01201604_01202608 FOXG1B coding upstream 139269 1200682 ~ 1204073 (-)
CI01000306_01284891_01287606 NA coding upstream 223410 1284677 ~ 1287630 (-)
G431639 NA non-coding downstream 22222 907354 ~ 946054 (-)
G431611 NA non-coding downstream 99783 857128 ~ 868493 (-)
G431618 NA non-coding downstream 183036 783967 ~ 785240 (-)
G431486 NA non-coding downstream 253747 712907 ~ 714529 (-)
G431655 NA non-coding upstream 21134 1082547 ~ 1084369 (-)
G431699 NA non-coding upstream 90384 1151797 ~ 1152039 (-)
G431700 NA non-coding upstream 90896 1152309 ~ 1152522 (-)
G431705 NA non-coding upstream 99404 1160817 ~ 1161597 (-)
G431792 NA non-coding upstream 120319 1181732 ~ 1182178 (-)
CI01000306_00482506_00494090 PFKLB, PFKL other downstream 484627 482482 ~ 494090 (-)
G431706 NA other upstream 101614 1163027 ~ 1163338 (-)
G431814 NA other upstream 250289 1311702 ~ 1312434 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other upstream 656520 1717933 ~ 1726043 (-)
G432022 NA other upstream 1938823 3000236 ~ 3003891 (-)
CI01000306_04544349_04545034 NA other upstream 3481310 4542723 ~ 4545244 (-)

Expression


Co-expression Network