G430425


Basic Information

Item Value
gene id G430425
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1033220 ~ 1045108 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU494221
TATATAATGTATAATATAAATTATGTACAAAAGGGTCAATGATGTGAGGGGTCATTTTTTTGTCCAAAGGCCTTAATAATAATAAAAAACAAAGATATGACATCCAAAGTGTGTAAGGTAGTACAACTAGATCTCTTTTATTGAATCCAAAAGGTTTTAATTATATTTTGCTACATATAAAGGGATTTTAAAGATTTTGAAGTGTCAAAGGTCATTTGGTTTAACCGTCCAAAGGCCAATACAGCCATTTCATTTGTGATTAAAATATCTTAAAATGTAATAAATGTATATGTTTTTTATTCTGGCATGATTTTATAACATCATATATCAACATAGTGCAAAATGGTTGTAAAAATTTTGTGTAGAAGTCGTTGCTTTGTTATGAGAAAGAACGTCCGGAAAAATTAATTTCATTGATGTCATTCGGAGTAACCAATATAAAGGGACCATTTTGGATTAAGTCATGTGGTCAATATCATGTGACATCATTCAGACATCTGCAAAGGACCACATGGTCATGAAGCAAAGTAACTAACTCTCTCTTAACTATTTGAAAAACTAATGTTTTCACTTGTTCATACGCATGTCCCGAAACATCAGGTCATTCGGTACAACCGCTATAAAACATGGAAAATGTTGTAATATTTTAAAAACTTGAACTAAATATAAAATGTTTGATTGTCCTTTTGCTAGCTAGCTAGATATCAGCCTGTTAGCATTGTTTGAAAATATCGTCATTTGGTAAAACCAAAAGTGTCATTCGGTAAAACCGAAATTTTGGTCAAACCGAATGACTTTTTTGGTGACAAATTCTTGTAAAAAATGACAAAAGCAGTGTTAATTGATTATAAAAACCACAATCTCATTGTTAACACCTAATAAAACTTCAAAATTAATTATATCTCCATTGTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTGTTTGTTTTTCTTTAAGCAAGTTTATTTTACTGAGCTTAGTTTTTAACAGCAGATGGCACTGCCGTACTCTGCTTGCTTCCAATTCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494221 True 1043 lncRNA 0.30 2 1033220 1045108

Neighbor

gene id symbol gene type direction distance location
CI01000306_01008614_01011977 RALB.S, RALBA, RALBB, RALB.L, RALB coding upstream 21243 1008614 ~ 1011977 (+)
CI01000306_00887579_00889885 NA coding upstream 142512 887190 ~ 890708 (+)
CI01000306_00730637_00781399 CLASP1 coding upstream 251821 730637 ~ 781399 (+)
CI01000306_00705287_00711760 CLCN4 coding upstream 320635 705287 ~ 714524 (+)
CI01000306_00693218_00693943 NA coding upstream 338661 693218 ~ 694559 (+)
CI01000306_01047698_01080329 TMEM63A, TMEM63B coding downstream 2590 1047698 ~ 1082259 (+)
CI01000306_01209847_01210850 ACYP2 coding downstream 164287 1209395 ~ 1211232 (+)
CI01000306_01224349_01255175 NA coding downstream 179042 1224150 ~ 1255472 (+)
CI01000306_01278230_01279369 NA coding downstream 233122 1278230 ~ 1279484 (+)
CI01000306_01293889_01308316 SPTBN1 coding downstream 248560 1293668 ~ 1308316 (+)
G430400 NA non-coding upstream 7117 1002858 ~ 1026103 (+)
G430419 NA non-coding upstream 48282 984515 ~ 984938 (+)
G430389 NA non-coding upstream 119459 907323 ~ 913761 (+)
G430344 NA non-coding upstream 226468 806517 ~ 806752 (+)
G430335 NA non-coding upstream 302979 729903 ~ 730241 (+)
G430433 NA non-coding downstream 25260 1070368 ~ 1071227 (+)
G430397 NA non-coding downstream 37420 1082528 ~ 1084265 (+)
G430434 NA non-coding downstream 50163 1095271 ~ 1095590 (+)
G430407 NA non-coding downstream 71710 1116818 ~ 1119768 (+)
G430460 NA non-coding downstream 115874 1160982 ~ 1161492 (+)
G430409 NA other upstream 33318 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 795851 235447 ~ 242861 (+)
G430452 NA other downstream 105489 1150597 ~ 1150938 (+)
G430719 NA other downstream 1103274 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1928048 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 2729036 3772689 ~ 3777550 (+)

Expression


Co-expression Network