Gene
RNA
| Item | Value |
|---|---|
| gene id | G430467 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 1168012 ~ 1168563 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU494269 | False | 237 | lncRNA | 0.31 | 2 | 1168012 | 1168563 |
| TU494268 | True | 351 | lncRNA | 0.31 | 2 | 1168129 | 1168563 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_01047698_01080329 | TMEM63A, TMEM63B | coding | upstream | 85753 | 1047698 ~ 1082259 (+) |
| CI01000306_01008614_01011977 | RALB.S, RALBA, RALBB, RALB.L, RALB | coding | upstream | 156035 | 1008614 ~ 1011977 (+) |
| CI01000306_00887579_00889885 | NA | coding | upstream | 277304 | 887190 ~ 890708 (+) |
| CI01000306_00730637_00781399 | CLASP1 | coding | upstream | 386613 | 730637 ~ 781399 (+) |
| CI01000306_00705287_00711760 | CLCN4 | coding | upstream | 455427 | 705287 ~ 714524 (+) |
| CI01000306_01209847_01210850 | ACYP2 | coding | downstream | 40832 | 1209395 ~ 1211232 (+) |
| CI01000306_01224349_01255175 | NA | coding | downstream | 55587 | 1224150 ~ 1255472 (+) |
| CI01000306_01278230_01279369 | NA | coding | downstream | 109667 | 1278230 ~ 1279484 (+) |
| CI01000306_01293889_01308316 | SPTBN1 | coding | downstream | 125105 | 1293668 ~ 1308316 (+) |
| CI01000306_01308428_01312462 | SPTBN1 | coding | downstream | 139865 | 1308428 ~ 1312870 (+) |
| G430462 | NA | non-coding | upstream | 4539 | 1163011 ~ 1163473 (+) |
| G430460 | NA | non-coding | upstream | 6520 | 1160982 ~ 1161492 (+) |
| G430407 | NA | non-coding | upstream | 48244 | 1116818 ~ 1119768 (+) |
| G430434 | NA | non-coding | upstream | 72422 | 1095271 ~ 1095590 (+) |
| G430397 | NA | non-coding | upstream | 83747 | 1082528 ~ 1084265 (+) |
| G430470 | NA | non-coding | downstream | 5123 | 1173686 ~ 1173906 (+) |
| G430477 | NA | non-coding | downstream | 23954 | 1192517 ~ 1192719 (+) |
| G430478 | NA | non-coding | downstream | 25185 | 1193748 ~ 1193960 (+) |
| G430113 | NA | non-coding | downstream | 67782 | 1236345 ~ 1270115 (+) |
| G430142 | NA | non-coding | downstream | 116127 | 1284690 ~ 1286761 (+) |
| G430452 | NA | other | upstream | 17074 | 1150597 ~ 1150938 (+) |
| G430409 | NA | other | upstream | 168110 | 925544 ~ 999902 (+) |
| CI01000306_00235686_00242814 | NA | other | upstream | 930643 | 235447 ~ 242861 (+) |
| G430719 | NA | other | downstream | 979819 | 2148382 ~ 2150954 (+) |
| CI01000306_02974291_02976718 | TP53INP2 | other | downstream | 1804593 | 2973156 ~ 2979157 (+) |
| CI01000306_03772689_03777211 | DYNLRB1 | other | downstream | 2605581 | 3772689 ~ 3777550 (+) |
| CI01000306_03778075_03781910 | MAP1LC3A, MAP1LC3A.L | other | downstream | 2609489 | 3778052 ~ 3783019 (+) |
