XLOC_012793


Basic Information

Item Value
gene id XLOC_012793
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 22099619 ~ 22100228 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026898
AAAACAAGATTGGTTGTGAATTGTCCTGTTGTTGATTCCTATTTAAACTCTTCATGGCTTGGAGGGTTTTCAAACGTCTGGCTGACACCTGACCAAGTAGGCCGCGTTCTCTCCTTTCTCTCATCCATGTACTCACACTTCAAGAATTCAACCTGTCTGACCAGATGTTTGTTAGATAACCACCTGCTGGGGCTTAAGGAAGACACGTTTGACACACTGCAGGAGGAGAAGGAAGCTTTGGTTCCTGTCAAAATACAGAGAGGTGTTTACAGTTTAACCAGGTGAATCGGGCTGTAATACTCACCCCCGGAGTGTTAGTTTTTAAAACAGAGTCTATTTAAGTTTTAGTTGCTTAGGTGATGGATGCTTAAGAATGTAAGCTATTCGAGAGAGGTCTGGTTAGTACAAGCTGATAAGATATGTGATACTCCCACCGCTGGTCTTCATTAGGCGTCATATATTCGAGAGGAAAGTGGGATGAAATAGCTGCACTTGAAATATCAGAAATTGTTGTCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026898 True 516 lncRNA 0.42 2 22099619 22100228

Neighbor

gene id symbol gene type direction distance location
XLOC_012792 CT573204.1 coding upstream 17866 22078144 ~ 22081753 (+)
XLOC_012791 ranbp10 coding upstream 79110 21951551 ~ 22020509 (+)
XLOC_012789 necab2 coding upstream 478803 21408794 ~ 21620816 (+)
XLOC_012790 NA coding upstream 626255 21469636 ~ 21473364 (+)
XLOC_012788 hydin coding upstream 698218 21273749 ~ 21401401 (+)
XLOC_012794 zgc:158868 coding downstream 9151 22109379 ~ 22116378 (+)
XLOC_012795 si:ch73-186j5.2 coding downstream 22844 22123072 ~ 22127985 (+)
XLOC_012796 ripor1 coding downstream 38696 22138924 ~ 22283398 (+)
XLOC_012797 ctcf coding downstream 185764 22285992 ~ 22295064 (+)
XLOC_012798 carmil2 coding downstream 202407 22302635 ~ 22396371 (+)
XLOC_012787 BX571884.1 non-coding upstream 907835 21191665 ~ 21191784 (+)
XLOC_012786 NA non-coding upstream 929871 21163424 ~ 21169748 (+)
XLOC_012781 BX548061.1 non-coding upstream 1076018 21021699 ~ 21023601 (+)
XLOC_012805 NA non-coding downstream 1358701 23458929 ~ 23463541 (+)
XLOC_012806 AL805905.1 non-coding downstream 1371918 23472146 ~ 23472260 (+)
XLOC_012807 NA non-coding downstream 1711156 23811384 ~ 23828058 (+)
XLOC_012808 NA non-coding downstream 1776212 23876440 ~ 23889042 (+)
XLOC_012809 CR847971.1 non-coding downstream 2377298 24477526 ~ 24483285 (+)

Expression


Co-expression Network