G431815



Basic Information


Item Value
gene id G431815
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1308031 ~ 1310878 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU495827
CAAGAAAATGCTGGACTTTTAATTTTTTCTGACTCACAGTGACGTGTTCGTAGTCTTGGCCGAGCTCGTGAGATCCAGCCACCACCTCTCTCTCGGCTATCCACTGCTCCAGATCGTCCACCTCCCGGTTCAGCTGGAAGAGGCGGAACCTCTCCTCCAGTTTGCCTCTCCTCTCCTCTGATAGGTCCTTCAGTCCAGCGTACAGCTTATCCACCTGTGATTGGCGCATGCCGATCCTCTCACTCTCAGGGTGGTTGGCGGCCACCAGGCCTCGGCTCGTCTTGGACAGTTGGTGAACAGTCTCAGCATAGTCCTCCACCGCCTGCTCCAAGATCTGGTGTTTCTTCAGCATGGCCACTGAACTCTGCTCATCTTTGGCCTTCTCTTCAGACATCATGTAGAGCTCCTGCTCGCTCATCCAGGCTTCAGCTTCAGCTGCATCGAAGTAGTACTGCTGGGCCTTATGGGCCTCCTCGAGTCTGGTGTGGCGTTTCTCCGTCTCCTGGATGATCAGGCTCCACAGCTGCTGCAGGTCGGTCAGTCGGGCTCGGATCGACTCCACGTTGGGGCTGTCGGCCTTCAGGATGCTCTGGCTGCGCTCGAATATGTCGTCACAGCGAGGCTGATGGCCCTGGATCTCCTTCTGTAATGTCTGATTGGATCTGACCCTCCAGGCCCACCAGCCATTTGTCCAGGTCGGCGCAGCTCTGTGTGAAGAGTTCGGCCTTGTTGGCGTCAAACAGGCACTGGGCTTTAGTCTGAGTTGTGGTTTCCAGTTCGGTCCACATCTTCTGCAGCGCCGCCAACTTCTCCTTCACTACAGCTTCTGTCTCCGGCTTCTCCGAGACCAGCTGCTTCGCTTCCTGCAGACAGACAGACATTTAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU495827 True 885 lncRNA 0.56 4 1308031 1310878

Neighbor


gene id symbol gene type direction distance location
CI01000306_01284891_01287606 NA coding downstream 20401 1284677 ~ 1287630 (-)
CI01000306_01201604_01202608 FOXG1B coding downstream 103958 1200682 ~ 1204073 (-)
CI01000306_01120958_01127237 SULT6B1 coding downstream 180471 1120816 ~ 1127560 (-)
CI01000306_01109880_01112379 VIPB coding downstream 195228 1109779 ~ 1112803 (-)
CI01000306_01086915_01093095 SLC29A1B coding downstream 214930 1086768 ~ 1093101 (-)
CI01000306_01439864_01463150 NA coding upstream 128908 1439786 ~ 1463150 (-)
CI01000306_01469486_01475137 NA coding upstream 157910 1468788 ~ 1475137 (-)
CI01000306_01476783_01478195 NA coding upstream 165786 1476664 ~ 1478195 (-)
CI01000306_01483485_01492511 ATL2, ATL2.L coding upstream 171994 1482872 ~ 1492511 (-)
CI01000306_01502721_01504240 NA coding upstream 191788 1502666 ~ 1504240 (-)
G431853 NA non-coding downstream 17686 1289950 ~ 1290345 (-)
G431852 NA non-coding downstream 21244 1286584 ~ 1286787 (-)
G431849 NA non-coding downstream 27961 1279518 ~ 1280070 (-)
G431823 NA non-coding downstream 29345 1236441 ~ 1278686 (-)
G431814 NA non-coding upstream 824 1311702 ~ 1312434 (-)
G431855 NA non-coding upstream 12296 1323174 ~ 1323386 (-)
G431857 NA non-coding upstream 13463 1324341 ~ 1324541 (-)
G431858 NA non-coding upstream 13675 1324553 ~ 1324758 (-)
G431877 NA non-coding upstream 68997 1379875 ~ 1380127 (-)
G431706 NA other downstream 144693 1163027 ~ 1163338 (-)
CI01000306_00482506_00494090 PFKLB, PFKL other downstream 824382 482482 ~ 494090 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other upstream 407055 1717933 ~ 1726043 (-)
G432022 NA other upstream 1689358 3000236 ~ 3003891 (-)
CI01000306_04544349_04545034 NA other upstream 3231845 4542723 ~ 4545244 (-)
G433450 NA other upstream 4050765 5361643 ~ 5383763 (-)

Expression



Co-expression Network