G430489


Basic Information

Item Value
gene id G430489
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1323063 ~ 1324428 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU494292
TTTCAGAGAAGCTAGCAATAGCAAGCTAGCTTTGAAAGCATAAGATACCTTAAGACAGGGTTGCTAGGTTTCCGTAAAGAAACCAGCCCAATTGCTATTCAAAAACTAGCCCATTCGCATTCTGGTGTGGCGACAAATCTCGAAATAGGGGCTGCATCCGAAAACTGAAAAATGCTGCCTTCGGGGGACGCGTTCCAAGGTAGGAAGGCATCAAGGCACGTCCGAATCCAAAGTTAGCTTCACTTCCTGTATTATGAGATGCCTTCATCTGATCGATTTTTAAAGGTAGCATAGATGTATCCTTCCCTGCCTTTGATATCCCACAATCCTGTGCTTTCAATTTCGGAGAAGCTAGCAATAGCAAGCTAGCTTTGAAAGCATAAGATACCTTCAGACAGGGTTGCTAGGTTTCCGTAACGAAACCAGCCCAACTGCTATTCAAAAACTAGCCCAAACGCATTTCGGTGTGGTGGGAAATCGAGTCCCCCCAGGAACTGGGTCTCCTCTAGGATCCAGAGTGATCCCATTGGTTCAACTGACTTTTAATGGGTAGTATTTTTAGCACCTGATTACAGTTCCTGCAAAATCACGTTATGATTTATGTAGTTTAAAATGCGTTAAAATGACCATTAATGTCTTTTAAATTACATGGTTCATTTAACTAAAGCTATAGACCTTATGTAGCCCCGCCCCTTTTCAGCGCTGCGCTCGTTGTCTTTTGTCTTCCGGTTTGTATTTCCACTGCGATCTTACGTATTTATGAATGAACTGCTCGTTTTAAAATGTTCCCGGTCTACTGACATTTGTTAAGACATCTGCTTTAAACATTACAATGCTCACGATAACTTTCATTAACTCTACAACAAGTAAATCCACTTCACCAGCTAATTATTCTTTGACAGCGATGCCATAGAAATGTACATGGCTACCGCAAAAACGGAAGTTCAAAGACAATATTACAAAGATGGCGGCGCGCTTGTTTCTCTGGCGCATAAGGTCTATAGAGGGTGTGCATAGGCGTCACTTTCCCGCCGGAACGCGCTCCCTCAGCTGGACTGAGTGGCAAAAGAACCTGCTGGGTGACTGGATTTAATAGGGGAAACTGCGAAAACGCGAGTAAAACACACGATTACACTAAAGGTTGGGCTCGAAAGTGTTCCTTACAACTTGTCAAATAAACCTAATCCATGGAAACTGACATGCAGCCAGGAATCGTGTTTCCTTACATTTATATGTGCCTGATTTCGACGCCAGGGAAATACATAAAGCAAATCTGCCTGTGAACCCTTTTTATAACTACAATATAGGTAGATTTAAATCCGAGAGATCACTTATCAGTGTTATATATATCGTCATATCATCCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494292 True 1366 lncRNA 0.42 1 1323063 1324428

Neighbor

gene id symbol gene type direction distance location
CI01000306_01315927_01321358 NA coding upstream 769 1315532 ~ 1322294 (+)
CI01000306_01308428_01312462 SPTBN1 coding upstream 10193 1308428 ~ 1312870 (+)
CI01000306_01293889_01308316 SPTBN1 coding upstream 14747 1293668 ~ 1308316 (+)
CI01000306_01278230_01279369 NA coding upstream 43579 1278230 ~ 1279484 (+)
CI01000306_01224349_01255175 NA coding upstream 67591 1224150 ~ 1255472 (+)
CI01000306_01329678_01378388 EML6, EML5 coding downstream 5250 1329678 ~ 1378510 (+)
CI01000306_01387861_01391135 NA coding downstream 63174 1387602 ~ 1392321 (+)
CI01000306_01429843_01430151 NA coding downstream 104385 1427779 ~ 1430275 (+)
CI01000306_01481595_01481955 NA coding downstream 157167 1481595 ~ 1482496 (+)
CI01000306_01578460_01578838 NA coding downstream 254032 1578460 ~ 1579027 (+)
G430182 NA non-coding upstream 33153 1288725 ~ 1289910 (+)
G430142 NA non-coding upstream 36302 1284690 ~ 1286761 (+)
G430113 NA non-coding upstream 52948 1236345 ~ 1270115 (+)
G430478 NA non-coding upstream 129103 1193748 ~ 1193960 (+)
G430477 NA non-coding upstream 130344 1192517 ~ 1192719 (+)
G430492 NA non-coding downstream 60206 1384634 ~ 1384851 (+)
G430497 NA non-coding downstream 71324 1395752 ~ 1395970 (+)
G430498 NA non-coding downstream 72485 1396913 ~ 1397177 (+)
G430499 NA non-coding downstream 75190 1399618 ~ 1399833 (+)
G430502 NA non-coding downstream 82602 1407030 ~ 1407249 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 104506 1209395 ~ 1211232 (+)
G430452 NA other upstream 172125 1150597 ~ 1150938 (+)
G430409 NA other upstream 323161 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1085694 235447 ~ 242861 (+)
G430719 NA other downstream 823954 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1648728 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 2449716 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 2453624 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 2483805 3807268 ~ 3811243 (+)

Expression


Co-expression Network