XLOC_012794 (zgc:158868)


Basic Information

Item Value
gene id XLOC_012794
gene name zgc:158868
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 22109379 ~ 22116378 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025520
GACTTTCACAGAGTTAATAGAGCGATTACTTAACAGCGATTACTCCCACACATCCTATACTGTACATGCTGACATATGTGTACAAGCCTCTCATTGTAGAAAGTGCAGGTCTCAGAACAGTCATGATGGCGTCTGTAATTTGTGACAGTGTTTTGGTAACCGGGTCAAACAGGGGAATTGGACTTGAGCTGGTTCACCAGCTAGTTGATTTACCCAAATCTCCAGGTCACATCTTTGCAGGCTGTAGAGACCCAGGTGGACCAAAAGCTCAGGAACTTCGGGATCTCGCTCAGAAGCACCAGGGTGTGATCACTGTTGTGCAACTTGATACAGATAGTCCAGATAGCATCAAAGAGGCTTCAAACTTAGTGGAATCCAAGCTGAACGGCAAAGGCTTAAATCTGATCATCAACAATGCTGGTGTGAACATCCCAGGTTCCCTAGTGGAGACAGGCAAAAAGGAGATGGTGGATTCGTACACGACTAATGTTGTAGGACCCATGCTCATTGCAAAGAATTTCCACCCCCTCTTGTGTAAAGCTGCAGCTCAGTTTCCTCAGTCAAGCATGTCTTGCAGTAGATCGGCTATTGTCAATGTCTCCACACTGCTGTCATCCATCACAAGATGCCCTGAGAATTTCTACAGGTCTCCAATGTACCCCTATCGCATCTGCAAGGCTGCACTGAACATGTTAACTCGCTGCTTGGCGGAGGATTTCAGAAAAGATGGCATTCTTGTTGCGTCTCTCCATCCAGGATGGGTCCAGACAGAAATGGGAGGCCCACAGGCTCCCCTGACGACAGCTGAGAGCGTCAGCGGCATGATAAAAGTCATCACAAGCCTCACTGAGAAAGACAGCGGGACTCTTTTAGATTGGGAAGGCAATAACATCCCTTGGTGATTGTGCAAGGCATCTTGTATGTCAGTTTGACATGTACTTCCACATCTTTGTGTCTGCGgtttgtgcaaaaaaaacaaacaaaaaa

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-070112-892 No description available

Ensembl:

ensembl_id ENSDARG00000069379

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025520 True 987 mRNA 0.47 6 22109379 22116378

Neighbor

gene id symbol gene type direction distance location
XLOC_012793 NA coding upstream 9151 22099619 ~ 22100228 (+)
XLOC_012792 CT573204.1 coding upstream 27626 22078144 ~ 22081753 (+)
XLOC_012791 ranbp10 coding upstream 88870 21951551 ~ 22020509 (+)
XLOC_012789 necab2 coding upstream 488563 21408794 ~ 21620816 (+)
XLOC_012790 NA coding upstream 636015 21469636 ~ 21473364 (+)
XLOC_012795 si:ch73-186j5.2 coding downstream 6694 22123072 ~ 22127985 (+)
XLOC_012796 ripor1 coding downstream 22546 22138924 ~ 22283398 (+)
XLOC_012797 ctcf coding downstream 169614 22285992 ~ 22295064 (+)
XLOC_012798 carmil2 coding downstream 186257 22302635 ~ 22396371 (+)
XLOC_012799 cfdp1 coding downstream 299673 22416051 ~ 22486767 (+)
XLOC_012787 BX571884.1 non-coding upstream 917595 21191665 ~ 21191784 (+)
XLOC_012786 NA non-coding upstream 939631 21163424 ~ 21169748 (+)
XLOC_012805 NA non-coding downstream 1342551 23458929 ~ 23463541 (+)
XLOC_012806 AL805905.1 non-coding downstream 1355768 23472146 ~ 23472260 (+)
XLOC_012807 NA non-coding downstream 1695006 23811384 ~ 23828058 (+)
XLOC_012808 NA non-coding downstream 1760062 23876440 ~ 23889042 (+)
XLOC_012809 CR847971.1 non-coding downstream 2361148 24477526 ~ 24483285 (+)

Expression


Co-expression Network