G430497


Basic Information

Item Value
gene id G430497
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1395752 ~ 1395970 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU494301
GTGCAAGTGAAGTTGATTGGTTAGAAAAGTAACAGCACATGCGCTGCAACAATCCACAAGATTTGACGTTTGCAGCACAAACTGAAGTTTAATAGTGTTAGAGGTTTGTTCGAATCACTAATCGTAAATATGAGCAATAATAACAATGATGCTTTATTTAGCAAACAGCACTGTGCTGATTCAATAAACACCACTAAATGCATTAAAGCAAAATTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494301 True 219 lncRNA 0.35 1 1395752 1395970

Neighbor

gene id symbol gene type direction distance location
CI01000306_01387861_01391135 NA coding upstream 3431 1387602 ~ 1392321 (+)
CI01000306_01329678_01378388 EML6, EML5 coding upstream 17242 1329678 ~ 1378510 (+)
CI01000306_01315927_01321358 NA coding upstream 73458 1315532 ~ 1322294 (+)
CI01000306_01308428_01312462 SPTBN1 coding upstream 82882 1308428 ~ 1312870 (+)
CI01000306_01293889_01308316 SPTBN1 coding upstream 87436 1293668 ~ 1308316 (+)
CI01000306_01429843_01430151 NA coding downstream 32843 1427779 ~ 1430275 (+)
CI01000306_01481595_01481955 NA coding downstream 85625 1481595 ~ 1482496 (+)
CI01000306_01578460_01578838 NA coding downstream 182490 1578460 ~ 1579027 (+)
CI01000306_01627469_01632656 RFC4 coding downstream 231499 1627469 ~ 1632729 (+)
CI01000306_01639496_01661857 ANKRD13C.S, ANKRD13C, ANKRD13C.L coding downstream 243095 1639065 ~ 1663148 (+)
G430492 NA non-coding upstream 10901 1384634 ~ 1384851 (+)
G430489 NA non-coding upstream 71324 1323063 ~ 1324428 (+)
G430182 NA non-coding upstream 105842 1288725 ~ 1289910 (+)
G430142 NA non-coding upstream 108991 1284690 ~ 1286761 (+)
G430113 NA non-coding upstream 125637 1236345 ~ 1270115 (+)
G430498 NA non-coding downstream 943 1396913 ~ 1397177 (+)
G430499 NA non-coding downstream 3648 1399618 ~ 1399833 (+)
G430502 NA non-coding downstream 11060 1407030 ~ 1407249 (+)
G430504 NA non-coding downstream 12360 1408330 ~ 1408560 (+)
G430509 NA non-coding downstream 19237 1415207 ~ 1415606 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 177195 1209395 ~ 1211232 (+)
G430452 NA other upstream 244814 1150597 ~ 1150938 (+)
G430409 NA other upstream 395850 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1158383 235447 ~ 242861 (+)
G430719 NA other downstream 752412 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1577186 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 2378174 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 2382082 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 2412263 3807268 ~ 3811243 (+)

Expression


Co-expression Network