G430515


Basic Information

Item Value
gene id G430515
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1431089 ~ 1431487 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU494322
GTTTAACTGAAACTGGGCTGGGATTTCTATTTCCCAGAATGCCCATGGCACTTGAAAGCGAGAGTAAATTCTAAAATTAAGTGATATATAATGTTTTTGGTGCAAGATTAATGTTAAATGGGAGATTTAGTAGTGATTAATGTTTTATGCTAATTTAGAAGAGTTTGTTAATGTGAGTGTTTGGAGAGTTACCATCATGGTGACAAGTGTTGCATGCGGCTTGGTTTGAGAGGAAGTATGTTAAATGCATTATATTGCTGTACTCATTCAGCAAGTGTTATACATGGTATTGTTAAAGGGTTAGTCCACCCAAAAATGAAAATTGTCATTTATTACTCACCCTCATGTCGTTCCATACCCATAAGACCTTCATTAATCTTCAGAACACAAATTAAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494322 True 399 lncRNA 0.35 1 1431089 1431487

Neighbor

gene id symbol gene type direction distance location
CI01000306_01429843_01430151 NA coding upstream 814 1427779 ~ 1430275 (+)
CI01000306_01387861_01391135 NA coding upstream 38768 1387602 ~ 1392321 (+)
CI01000306_01329678_01378388 EML6, EML5 coding upstream 52579 1329678 ~ 1378510 (+)
CI01000306_01315927_01321358 NA coding upstream 108795 1315532 ~ 1322294 (+)
CI01000306_01308428_01312462 SPTBN1 coding upstream 118219 1308428 ~ 1312870 (+)
CI01000306_01481595_01481955 NA coding downstream 50108 1481595 ~ 1482496 (+)
CI01000306_01578460_01578838 NA coding downstream 146973 1578460 ~ 1579027 (+)
CI01000306_01627469_01632656 RFC4 coding downstream 195982 1627469 ~ 1632729 (+)
CI01000306_01639496_01661857 ANKRD13C.S, ANKRD13C, ANKRD13C.L coding downstream 207578 1639065 ~ 1663148 (+)
CI01000306_01679537_01704400 NA coding downstream 248050 1679537 ~ 1704951 (+)
G430509 NA non-coding upstream 15483 1415207 ~ 1415606 (+)
G430504 NA non-coding upstream 22529 1408330 ~ 1408560 (+)
G430502 NA non-coding upstream 23840 1407030 ~ 1407249 (+)
G430499 NA non-coding upstream 31256 1399618 ~ 1399833 (+)
G430161 NA non-coding downstream 5608 1437095 ~ 1439973 (+)
G430533 NA non-coding downstream 71902 1503389 ~ 1503601 (+)
G430534 NA non-coding downstream 75142 1506629 ~ 1506862 (+)
G430133 NA non-coding downstream 97665 1529152 ~ 1531757 (+)
G430549 NA non-coding downstream 161666 1593153 ~ 1593740 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 212532 1209395 ~ 1211232 (+)
G430452 NA other upstream 280151 1150597 ~ 1150938 (+)
G430409 NA other upstream 431187 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1193720 235447 ~ 242861 (+)
G430719 NA other downstream 716895 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1541669 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 2342657 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 2346565 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 2376746 3807268 ~ 3811243 (+)

Expression


Co-expression Network