Gene
RNA
| Item | Value |
|---|---|
| gene id | G430534 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 1506629 ~ 1506862 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU494344 | True | 234 | lncRNA | 0.38 | 1 | 1506629 | 1506862 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_01481595_01481955 | NA | coding | upstream | 24133 | 1481595 ~ 1482496 (+) |
| CI01000306_01429843_01430151 | NA | coding | upstream | 76354 | 1427779 ~ 1430275 (+) |
| CI01000306_01387861_01391135 | NA | coding | upstream | 114308 | 1387602 ~ 1392321 (+) |
| CI01000306_01329678_01378388 | EML6, EML5 | coding | upstream | 128119 | 1329678 ~ 1378510 (+) |
| CI01000306_01315927_01321358 | NA | coding | upstream | 184335 | 1315532 ~ 1322294 (+) |
| CI01000306_01578460_01578838 | NA | coding | downstream | 71598 | 1578460 ~ 1579027 (+) |
| CI01000306_01627469_01632656 | RFC4 | coding | downstream | 120607 | 1627469 ~ 1632729 (+) |
| CI01000306_01639496_01661857 | ANKRD13C.S, ANKRD13C, ANKRD13C.L | coding | downstream | 132203 | 1639065 ~ 1663148 (+) |
| CI01000306_01679537_01704400 | NA | coding | downstream | 172675 | 1679537 ~ 1704951 (+) |
| CI01000306_01811531_01821737 | NA | coding | downstream | 304669 | 1811531 ~ 1821864 (+) |
| G430533 | NA | non-coding | upstream | 3028 | 1503389 ~ 1503601 (+) |
| G430161 | NA | non-coding | upstream | 66656 | 1437095 ~ 1439973 (+) |
| G430515 | NA | non-coding | upstream | 75142 | 1431089 ~ 1431487 (+) |
| G430509 | NA | non-coding | upstream | 91023 | 1415207 ~ 1415606 (+) |
| G430133 | NA | non-coding | downstream | 22290 | 1529152 ~ 1531757 (+) |
| G430549 | NA | non-coding | downstream | 86291 | 1593153 ~ 1593740 (+) |
| G430554 | NA | non-coding | downstream | 110212 | 1617074 ~ 1617414 (+) |
| G430555 | NA | non-coding | downstream | 110876 | 1617738 ~ 1617989 (+) |
| G430135 | NA | non-coding | downstream | 118454 | 1625316 ~ 1626000 (+) |
| CI01000306_01209847_01210850 | ACYP2 | other | upstream | 288072 | 1209395 ~ 1211232 (+) |
| G430452 | NA | other | upstream | 355691 | 1150597 ~ 1150938 (+) |
| G430409 | NA | other | upstream | 506727 | 925544 ~ 999902 (+) |
| CI01000306_00235686_00242814 | NA | other | upstream | 1269260 | 235447 ~ 242861 (+) |
| G430719 | NA | other | downstream | 641520 | 2148382 ~ 2150954 (+) |
| CI01000306_02974291_02976718 | TP53INP2 | other | downstream | 1466294 | 2973156 ~ 2979157 (+) |
| CI01000306_03772689_03777211 | DYNLRB1 | other | downstream | 2267282 | 3772689 ~ 3777550 (+) |
| CI01000306_03778075_03781910 | MAP1LC3A, MAP1LC3A.L | other | downstream | 2271190 | 3778052 ~ 3783019 (+) |
| CI01000306_03807268_03810946 | NA | other | downstream | 2301371 | 3807268 ~ 3811243 (+) |
