G430554


Basic Information

Item Value
gene id G430554
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1617074 ~ 1617414 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU494366
GACATGATCAACATCTGATCAACATTTGAGCAACATCTAAACTGGAATACCGGAATAAAAGTTTATAGTTCAGATATAAACACTGATGTCTACAGTAGTGATCAAAATAGAGTAAATCACCTTTTGAAAGTAACTTGATGCTTCAAATAAAGTTTGTGTCGATTACATCATTACACCAGTAGGTGGCGACAAGTGACTGTTAAAAAAAAAAAAAATGTATGCGTCACTGAATCATTCATTCAAGCGATTCATTTAAAAACGCTGATTCATCCAGTAATGAAACAAGTGAAGCCTTTACGAGTGAGTCAAAAACTAAAAAGTTAAAAACTAGACATTAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494366 True 341 lncRNA 0.32 1 1617074 1617414

Neighbor

gene id symbol gene type direction distance location
CI01000306_01578460_01578838 NA coding upstream 38047 1578460 ~ 1579027 (+)
CI01000306_01481595_01481955 NA coding upstream 134578 1481595 ~ 1482496 (+)
CI01000306_01429843_01430151 NA coding upstream 186799 1427779 ~ 1430275 (+)
CI01000306_01387861_01391135 NA coding upstream 224753 1387602 ~ 1392321 (+)
CI01000306_01329678_01378388 EML6, EML5 coding upstream 238564 1329678 ~ 1378510 (+)
CI01000306_01627469_01632656 RFC4 coding downstream 10055 1627469 ~ 1632729 (+)
CI01000306_01639496_01661857 ANKRD13C.S, ANKRD13C, ANKRD13C.L coding downstream 21651 1639065 ~ 1663148 (+)
CI01000306_01679537_01704400 NA coding downstream 62123 1679537 ~ 1704951 (+)
CI01000306_01811531_01821737 NA coding downstream 194117 1811531 ~ 1821864 (+)
CI01000306_01854835_01855388 NA coding downstream 237421 1854835 ~ 1855560 (+)
G430549 NA non-coding upstream 23334 1593153 ~ 1593740 (+)
G430133 NA non-coding upstream 85317 1529152 ~ 1531757 (+)
G430534 NA non-coding upstream 110212 1506629 ~ 1506862 (+)
G430533 NA non-coding upstream 113473 1503389 ~ 1503601 (+)
G430161 NA non-coding upstream 177101 1437095 ~ 1439973 (+)
G430555 NA non-coding downstream 324 1617738 ~ 1617989 (+)
G430135 NA non-coding downstream 7902 1625316 ~ 1626000 (+)
G430082 NA non-coding downstream 87957 1705371 ~ 1706072 (+)
G430153 NA non-coding downstream 95283 1712697 ~ 1714250 (+)
G430569 NA non-coding downstream 146840 1764254 ~ 1764486 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 398517 1209395 ~ 1211232 (+)
G430452 NA other upstream 466136 1150597 ~ 1150938 (+)
G430409 NA other upstream 617172 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1379705 235447 ~ 242861 (+)
G430719 NA other downstream 530968 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1355742 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 2156730 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 2160638 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 2190819 3807268 ~ 3811243 (+)

Expression


Co-expression Network