G430811


Basic Information

Item Value
gene id G430811
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 2386284 ~ 2386558 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU494651
CAGGGATGACGTGTTTTTGTAGGCCAATCCGGAAGTTAGCGGCGCACGGGTTCCCTCGATCGAAAGCCTATGCATTTTTCCCATAGACTTTTGGAAAATCGCAAAAAATAAGCTCTGTGTTTAACAAAGGGTCATGACACTTACACGTTTTGTCTATCAAGATAATCTTTACAAGTTAACACAACATTTATATATTTTGAAGCCTAAATAAAGTCATCAGATATAAAAAGCTAACAGTAGGCTATAAACGGACTACAGCACACCATGGTCGCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494651 True 275 lncRNA 0.40 1 2386284 2386558

Neighbor

gene id symbol gene type direction distance location
CI01000306_02369579_02380912 REM1, GEM coding upstream 4962 2369579 ~ 2381322 (+)
CI01000306_02359989_02366944 NA coding upstream 19287 2359989 ~ 2366997 (+)
CI01000306_02354432_02358965 PNP4A coding upstream 26783 2353181 ~ 2359501 (+)
CI01000306_02263738_02279937 NA coding upstream 106272 2263618 ~ 2280012 (+)
CI01000306_02238316_02241601 MAF1 coding upstream 143884 2238316 ~ 2242400 (+)
CI01000306_02389329_02392416 RBM39, RBM39A, RBM39B coding downstream 2771 2389329 ~ 2392960 (+)
CI01000306_02398383_02404841 NFS1 coding downstream 11309 2397867 ~ 2404903 (+)
CI01000306_02552479_02576156 NA coding downstream 165542 2552100 ~ 2576536 (+)
CI01000306_02591160_02596388 SYT6 coding downstream 204602 2591160 ~ 2597618 (+)
CI01000306_02614704_02617766 NA coding downstream 227974 2614532 ~ 2618085 (+)
G430805 NA non-coding upstream 33345 2352711 ~ 2352939 (+)
G430745 NA non-coding upstream 100998 2270777 ~ 2285286 (+)
G430739 NA non-coding upstream 193903 2159462 ~ 2192381 (+)
CI01000306_02112910_02114040 ARF4B non-coding upstream 272182 2112815 ~ 2114420 (+)
G430632 NA non-coding upstream 356992 2003702 ~ 2029292 (+)
G430834 NA non-coding downstream 95548 2482106 ~ 2483041 (+)
G430931 NA non-coding downstream 497333 2883891 ~ 3238771 (+)
G430690 NA non-coding downstream 649510 3036068 ~ 3054700 (+)
G430951 NA non-coding downstream 663339 3049897 ~ 3050294 (+)
CI01000306_03048314_03055936 NA non-coding downstream 666454 3048314 ~ 3056098 (+)
G430719 NA other upstream 235330 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 1167727 1209395 ~ 1211232 (+)
G430452 NA other upstream 1235346 1150597 ~ 1150938 (+)
G430409 NA other upstream 1386382 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 2148915 235447 ~ 242861 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 586598 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 1387586 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 1391494 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 1421675 3807268 ~ 3811243 (+)
G432583 NA other downstream 1939844 4326402 ~ 4327822 (+)

Expression


Co-expression Network