G430690


Basic Information

Item Value
gene id G430690
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 3036068 ~ 3054700 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU494528
TTTTTATTTTATTTTACTTTTTTGCTTCAGAAAATTTATTCTGGTAACAATGAAATGCAAATCACAATTGTTTACTCAATTCGTTAAAATGGTACAACTGATTAATGAAACAAATAAAAAGATATACAAAATGTTCAAACAAACAAAAATACCAGTGCAATGCATCTATTGCCAAAAGGGTCAAATGTCATTTGCATAGCTGAGGTGGCTGATGGAGTTTGTTGTGAAAACTCGAAGATAAAAGATACATTATCAAAACCAGCTTGACATGTCAGAGATAAAGTCGAGTGAAAATATAAAATAGCCTACTGAATAAGAGAATTAAAACTTTCTCCTCCGCTGACACACACACACACACAAAACACACACACACACACAAGATGGTTTGCTGGTCTTGCAGCTGGTTTTAGAGAAGTTTTGGGTACACTGTAAAAANNNNNNNNAAAAAAAAAAAAAAATTCTTTTATTCAGCAAAGATGCATTACATTGATTAAAAGTGACAGTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU494528 True 508 lncRNA 0.31 3 3036068 3054700

Neighbor

gene id symbol gene type direction distance location
CI01000306_03018466_03023859 FAM83D coding upstream 11977 3018134 ~ 3024091 (+)
CI01000306_02995035_03002605 TOP1, TOP1L coding upstream 33401 2995035 ~ 3002667 (+)
CI01000306_02983064_02988454 CYLDB coding upstream 47487 2982873 ~ 2988581 (+)
CI01000306_02974291_02976718 TP53INP2 coding upstream 59305 2973156 ~ 2979157 (+)
CI01000306_02906259_02914960 TRPC4APA, TRPC4AP coding upstream 119730 2906259 ~ 2916338 (+)
CI01000306_03062452_03066451 ADNPA coding downstream 7752 3062452 ~ 3066656 (+)
CI01000306_03081487_03082695 NA coding downstream 26135 3080835 ~ 3084309 (+)
CI01000306_03118178_03120842 OPN1SW2 coding downstream 63288 3117988 ~ 3120923 (+)
CI01000306_03123572_03128332 KFH-R, OPN1LW1, OPN1LW2 coding downstream 68734 3123434 ~ 3129725 (+)
CI01000306_03132695_03139713 GNL3L coding downstream 77995 3132695 ~ 3139724 (+)
G430834 NA non-coding upstream 553027 2482106 ~ 2483041 (+)
G430811 NA non-coding upstream 649510 2386284 ~ 2386558 (+)
G430805 NA non-coding upstream 683129 2352711 ~ 2352939 (+)
G430745 NA non-coding upstream 750782 2270777 ~ 2285286 (+)
G430739 NA non-coding upstream 843687 2159462 ~ 2192381 (+)
G430716 NA non-coding downstream 43944 3098644 ~ 3099359 (+)
G430987 NA non-coding downstream 226031 3280731 ~ 3280990 (+)
G431039 NA non-coding downstream 305077 3359777 ~ 3370252 (+)
G431107 NA non-coding downstream 432823 3487523 ~ 3488001 (+)
G431125 NA non-coding downstream 463354 3518054 ~ 3518312 (+)
G430719 NA other upstream 885114 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 1817511 1209395 ~ 1211232 (+)
G430452 NA other upstream 1885130 1150597 ~ 1150938 (+)
G430409 NA other upstream 2036166 925544 ~ 999902 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 719444 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 723352 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 753533 3807268 ~ 3811243 (+)
G432583 NA other downstream 1271702 4326402 ~ 4327822 (+)
G432678 NA other downstream 1467482 4522182 ~ 4522536 (+)

Expression


Co-expression Network