Gene
RNA
| Item | Value |
|---|---|
| gene id | G430716 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 3098644 ~ 3099359 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU494554 | True | 523 | lncRNA | 0.55 | 3 | 3098644 | 3099359 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_03081487_03082695 | NA | coding | upstream | 14335 | 3080835 ~ 3084309 (+) |
| CI01000306_03062452_03066451 | ADNPA | coding | upstream | 31988 | 3062452 ~ 3066656 (+) |
| CI01000306_03048314_03055936 | NA | coding | upstream | 42546 | 3048314 ~ 3056098 (+) |
| CI01000306_03018466_03023859 | FAM83D | coding | upstream | 74553 | 3018134 ~ 3024091 (+) |
| CI01000306_02995035_03002605 | TOP1, TOP1L | coding | upstream | 95977 | 2995035 ~ 3002667 (+) |
| CI01000306_03118178_03120842 | OPN1SW2 | coding | downstream | 18629 | 3117988 ~ 3120923 (+) |
| CI01000306_03123572_03128332 | KFH-R, OPN1LW1, OPN1LW2 | coding | downstream | 24075 | 3123434 ~ 3129725 (+) |
| CI01000306_03132695_03139713 | GNL3L | coding | downstream | 33336 | 3132695 ~ 3139724 (+) |
| CI01000306_03141095_03149372 | TFE3B | coding | downstream | 41736 | 3141095 ~ 3149434 (+) |
| CI01000306_03163659_03168243 | CXXC1B | coding | downstream | 63914 | 3163273 ~ 3168338 (+) |
| G430690 | NA | non-coding | upstream | 43944 | 3036068 ~ 3054700 (+) |
| G430951 | NA | non-coding | upstream | 48350 | 3049897 ~ 3050294 (+) |
| G430834 | NA | non-coding | upstream | 615603 | 2482106 ~ 2483041 (+) |
| G430811 | NA | non-coding | upstream | 712086 | 2386284 ~ 2386558 (+) |
| G430987 | NA | non-coding | downstream | 181372 | 3280731 ~ 3280990 (+) |
| G431039 | NA | non-coding | downstream | 260418 | 3359777 ~ 3370252 (+) |
| G431107 | NA | non-coding | downstream | 388164 | 3487523 ~ 3488001 (+) |
| G431125 | NA | non-coding | downstream | 418695 | 3518054 ~ 3518312 (+) |
| G431129 | NA | non-coding | downstream | 432535 | 3531894 ~ 3532107 (+) |
| CI01000306_02974291_02976718 | TP53INP2 | other | upstream | 119487 | 2973156 ~ 2979157 (+) |
| G430719 | NA | other | upstream | 947690 | 2148382 ~ 2150954 (+) |
| CI01000306_01209847_01210850 | ACYP2 | other | upstream | 1880087 | 1209395 ~ 1211232 (+) |
| G430452 | NA | other | upstream | 1947706 | 1150597 ~ 1150938 (+) |
| G430409 | NA | other | upstream | 2098742 | 925544 ~ 999902 (+) |
| CI01000306_03772689_03777211 | DYNLRB1 | other | downstream | 674785 | 3772689 ~ 3777550 (+) |
| CI01000306_03778075_03781910 | MAP1LC3A, MAP1LC3A.L | other | downstream | 678693 | 3778052 ~ 3783019 (+) |
| CI01000306_03807268_03810946 | NA | other | downstream | 708874 | 3807268 ~ 3811243 (+) |
| G432583 | NA | other | downstream | 1227043 | 4326402 ~ 4327822 (+) |
| G432678 | NA | other | downstream | 1422823 | 4522182 ~ 4522536 (+) |
