Gene
RNA
| Item | Value |
|---|---|
| gene id | G432282 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 3138791 ~ 3139881 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU496373 | True | 682 | lncRNA | 0.44 | 4 | 3138791 | 3139881 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_03086600_03106758 | HCFC1B, HCFC1A, HCFC1 | coding | downstream | 30576 | 3086510 ~ 3108215 (-) |
| CI01000306_03070842_03073585 | GATA1A | coding | downstream | 65157 | 3070578 ~ 3073634 (-) |
| CI01000306_03044394_03045362 | NA | coding | downstream | 92586 | 3043376 ~ 3046205 (-) |
| CI01000306_03006241_03009198 | NA | coding | downstream | 129435 | 3006190 ~ 3009356 (-) |
| CI01000306_02966994_02968675 | SNAI1A | coding | downstream | 169605 | 2965937 ~ 2969186 (-) |
| CI01000306_03258305_03268722 | BRPF3A | coding | upstream | 117342 | 3257223 ~ 3268722 (-) |
| CI01000306_03278833_03292888 | PLCH2B | coding | upstream | 138952 | 3278833 ~ 3292888 (-) |
| CI01000306_03296768_03330783 | SKIA, SKIB, SKI | coding | upstream | 155842 | 3295723 ~ 3330783 (-) |
| CI01000306_03334185_03336292 | NA | coding | upstream | 193951 | 3333832 ~ 3336292 (-) |
| CI01000306_03357647_03435533 | KAZN, KAZNB | coding | upstream | 217766 | 3357647 ~ 3435533 (-) |
| G432285 | NA | non-coding | downstream | 1059 | 3137285 ~ 3137732 (-) |
| G432280 | NA | non-coding | downstream | 12837 | 3123477 ~ 3125954 (-) |
| G432051 | NA | non-coding | downstream | 182447 | 2952249 ~ 2956344 (-) |
| G432032 | NA | non-coding | downstream | 257058 | 2876373 ~ 2881733 (-) |
| G432196 | NA | non-coding | downstream | 380032 | 2758459 ~ 2758759 (-) |
| G432281 | NA | non-coding | upstream | 9059 | 3148940 ~ 3152959 (-) |
| G432308 | NA | non-coding | upstream | 91630 | 3231511 ~ 3277198 (-) |
| G432370 | NA | non-coding | upstream | 144618 | 3284499 ~ 3284782 (-) |
| G432406 | NA | non-coding | upstream | 398621 | 3538502 ~ 3538723 (-) |
| G432022 | NA | other | downstream | 134900 | 3000236 ~ 3003891 (-) |
| CI01000306_01723684_01726043 | MAFGA, MAFGB, MAFG | other | downstream | 1389841 | 1717933 ~ 1726043 (-) |
| G431814 | NA | other | downstream | 1826357 | 1311702 ~ 1312434 (-) |
| G431706 | NA | other | downstream | 1975453 | 1163027 ~ 1163338 (-) |
| CI01000306_00482506_00494090 | PFKLB, PFKL | other | downstream | 2655142 | 482482 ~ 494090 (-) |
| CI01000306_04544349_04545034 | NA | other | upstream | 1402842 | 4542723 ~ 4545244 (-) |
| G433450 | NA | other | upstream | 2221762 | 5361643 ~ 5383763 (-) |
| G433670 | NA | other | upstream | 2901133 | 6041014 ~ 6041283 (-) |
| G433985 | NA | other | upstream | 3056226 | 6196107 ~ 6197210 (-) |
| G434016 | NA | other | upstream | 3215299 | 6355180 ~ 6361643 (-) |
