Gene
RNA
| Item | Value |
|---|---|
| gene id | G431107 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 3487523 ~ 3488001 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU494985 | True | 253 | lncRNA | 0.32 | 2 | 3487523 | 3488001 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_03270390_03277409 | NA | coding | upstream | 209967 | 3270390 ~ 3277556 (+) |
| CI01000306_03248839_03256675 | MON1BB, MON1B | coding | upstream | 230460 | 3248839 ~ 3257063 (+) |
| CI01000306_03244498_03247567 | OTUD5B, OTUD5, OTUD5A | coding | upstream | 239695 | 3242896 ~ 3247828 (+) |
| CI01000306_03219408_03238461 | GRM7, GRM6B | coding | upstream | 249049 | 3219408 ~ 3238474 (+) |
| CI01000306_03214469_03216852 | COMTB | coding | upstream | 270643 | 3214469 ~ 3216880 (+) |
| CI01000306_03612105_03612431 | NA | coding | downstream | 123804 | 3611805 ~ 3612761 (+) |
| CI01000306_03642939_03646831 | PPCS | coding | downstream | 154938 | 3642939 ~ 3647153 (+) |
| CI01000306_03658929_03661523 | RBM12 | coding | downstream | 170639 | 3658640 ~ 3662015 (+) |
| CI01000306_03666143_03671601 | NA | coding | downstream | 178142 | 3666143 ~ 3672675 (+) |
| CI01000306_03677906_03697637 | NA | coding | downstream | 189905 | 3677906 ~ 3697792 (+) |
| G431039 | NA | non-coding | upstream | 117271 | 3359777 ~ 3370252 (+) |
| G430987 | NA | non-coding | upstream | 206533 | 3280731 ~ 3280990 (+) |
| G430716 | NA | non-coding | upstream | 388164 | 3098644 ~ 3099359 (+) |
| CI01000306_03048314_03055936 | NA | non-coding | upstream | 431453 | 3048314 ~ 3056098 (+) |
| G430690 | NA | non-coding | upstream | 432823 | 3036068 ~ 3054700 (+) |
| G431125 | NA | non-coding | downstream | 30053 | 3518054 ~ 3518312 (+) |
| G431129 | NA | non-coding | downstream | 43893 | 3531894 ~ 3532107 (+) |
| G431130 | NA | non-coding | downstream | 44603 | 3532604 ~ 3537455 (+) |
| G431134 | NA | non-coding | downstream | 50784 | 3538785 ~ 3596369 (+) |
| G431226 | NA | non-coding | downstream | 279161 | 3767162 ~ 3767393 (+) |
| CI01000306_02974291_02976718 | TP53INP2 | other | upstream | 508366 | 2973156 ~ 2979157 (+) |
| G430719 | NA | other | upstream | 1336569 | 2148382 ~ 2150954 (+) |
| CI01000306_01209847_01210850 | ACYP2 | other | upstream | 2268966 | 1209395 ~ 1211232 (+) |
| G430452 | NA | other | upstream | 2336585 | 1150597 ~ 1150938 (+) |
| G430409 | NA | other | upstream | 2487621 | 925544 ~ 999902 (+) |
| CI01000306_03772689_03777211 | DYNLRB1 | other | downstream | 286143 | 3772689 ~ 3777550 (+) |
| CI01000306_03778075_03781910 | MAP1LC3A, MAP1LC3A.L | other | downstream | 290051 | 3778052 ~ 3783019 (+) |
| CI01000306_03807268_03810946 | NA | other | downstream | 320232 | 3807268 ~ 3811243 (+) |
| G432583 | NA | other | downstream | 838401 | 4326402 ~ 4327822 (+) |
| G432678 | NA | other | downstream | 1034181 | 4522182 ~ 4522536 (+) |
