G431237


Basic Information

Item Value
gene id G431237
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 3804384 ~ 3805161 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU495123
ATCGAGCATCACTGCTTTGAAGAGCCGCGCGCATGTCCTCCACCAATTCCCTGAGACTCGCATTTTCCTCCTCAAGTTTGGCTATCCTGTCCTCGGCCTCCTCAAGGGCCACGATTTCCTCGTAACACTCCCTGGTGCAGGATCCCAGCTGCCTACAACCTGATGTGTGTCTATCCTCAGTGGGAGAAGAAGGCTCTCCACTTTCACGCTTATTACTGGTACCCAACGACAGCAGCTTCTCGCGCCGCCTCAAAGGGCTCCGGAGTCTGATCTGCGTCTCTATATGCTCGCTCTCCTTGCCAACCAACAACCTCCCATTCTCATACTGACACCCAGCTTTGGTACTGAAATAACCGCAGAGTTTTGCGTGAAACTGCCTGAAGCTGAACTCTTTGGGTAGATTATCCAATATCCCCGCGCATTCCTCTAGATCACACTCTTTATTGAGTCCTAAAATCTCGCAAAGAATGTTAAAATCCTCGGCTGGTATTTTTCCATCTCCCTGACAGTCTAGATGATGAAATATCTCTTGGAGGTATTGATCCAGCCCGGTTGCGAGGACTATAATTTCGTTTTCCACTCCACGGTCTAGTCCGTAATGATACGCCAGAGTGCTCACTATCCATTGTGTCCTGCGCGCGGGTCGGCTGTATGGATCGCATGCGTCCGACTTTTCCATCCTTTTTCCCCTCACAAGAATTCCATTTATAGAGTCTAAATGGATTAATGGATTCAACAGATCCTCTAAGCACACAAACAGCATACCAAGTTCATGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU495123 True 778 lncRNA 0.49 1 3804384 3805161

Neighbor

gene id symbol gene type direction distance location
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L coding upstream 22342 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 coding upstream 26861 3772689 ~ 3777550 (+)
CI01000306_03704267_03746574 UNM_SA1614 coding upstream 57463 3704267 ~ 3746921 (+)
CI01000306_03677906_03697637 NA coding upstream 106592 3677906 ~ 3697792 (+)
CI01000306_03666143_03671601 NA coding upstream 131709 3666143 ~ 3672675 (+)
CI01000306_03807268_03810946 NA coding downstream 2107 3807268 ~ 3811243 (+)
CI01000306_03827847_03828735 NA coding downstream 20576 3825737 ~ 3828845 (+)
CI01000306_03889176_03889334 NA coding downstream 83187 3888348 ~ 3889371 (+)
CI01000306_04050451_04054257 NA coding downstream 245171 4050332 ~ 4054402 (+)
CI01000306_04077126_04078242 NA coding downstream 271965 4077126 ~ 4078531 (+)
G431238 NA non-coding upstream 743 3803250 ~ 3803641 (+)
G431252 NA non-coding upstream 3527 3800634 ~ 3800857 (+)
G431251 NA non-coding upstream 3773 3800216 ~ 3800611 (+)
G431249 NA non-coding upstream 6490 3797671 ~ 3797894 (+)
G431242 NA non-coding upstream 12397 3790776 ~ 3791987 (+)
G431334 NA non-coding downstream 210324 4015485 ~ 4015758 (+)
G431364 NA non-coding downstream 210751 4015912 ~ 4016335 (+)
G431368 NA non-coding downstream 222561 4027722 ~ 4028046 (+)
G431383 NA non-coding downstream 293588 4098749 ~ 4099046 (+)
G432537 NA non-coding downstream 395483 4200644 ~ 4200874 (+)
CI01000306_02974291_02976718 TP53INP2 other upstream 825227 2973156 ~ 2979157 (+)
G430719 NA other upstream 1653430 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 2585827 1209395 ~ 1211232 (+)
G432583 NA other downstream 521241 4326402 ~ 4327822 (+)
G432678 NA other downstream 717021 4522182 ~ 4522536 (+)
G432958 NA other downstream 1853767 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 2175352 5975822 ~ 5986288 (+)

Expression


Co-expression Network