G431334


Basic Information

Item Value
gene id G431334
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 4015485 ~ 4015758 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU495229
TGAAAATCCCTTATTATACCTTCTAAGCAGTGTTGGAGAGGGTGACTAAAACAAATATTGGCTAACAGCAATATTTAAAGGGATAGTTCACCCAAAAATGAAAATTCACTTGTTGAATGACTTTCTTTCTTCTGTGGAACACAAAAGATATTTTGAAGAATGTTTAAACCAGTTGTTTCCATACAATGAAAATCAGTGGGGTCCAACAAACCTTGGACACCAAAGACTTTCATTGTATGGTCAAAAAAAGGGTGAGCCTATAGAGACAGAGCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU495229 True 274 lncRNA 0.36 1 4015485 4015758

Neighbor

gene id symbol gene type direction distance location
CI01000306_03889176_03889334 NA coding upstream 126114 3888348 ~ 3889371 (+)
CI01000306_03827847_03828735 NA coding upstream 186640 3825737 ~ 3828845 (+)
CI01000306_03807268_03810946 NA coding upstream 204242 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L coding upstream 233443 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 coding upstream 237962 3772689 ~ 3777550 (+)
CI01000306_04050451_04054257 NA coding downstream 34574 4050332 ~ 4054402 (+)
CI01000306_04077126_04078242 NA coding downstream 61368 4077126 ~ 4078531 (+)
CI01000306_04111278_04162816 FBLN2 coding downstream 95035 4110793 ~ 4163844 (+)
CI01000306_04253810_04255748 BARX1 coding downstream 237405 4253163 ~ 4256841 (+)
CI01000306_04454619_04454783 NA coding downstream 438861 4454619 ~ 4455552 (+)
G431237 NA non-coding upstream 210324 3804384 ~ 3805161 (+)
G431238 NA non-coding upstream 211844 3803250 ~ 3803641 (+)
G431252 NA non-coding upstream 214628 3800634 ~ 3800857 (+)
G431251 NA non-coding upstream 214874 3800216 ~ 3800611 (+)
G431249 NA non-coding upstream 217591 3797671 ~ 3797894 (+)
G431364 NA non-coding downstream 154 4015912 ~ 4016335 (+)
G431368 NA non-coding downstream 11964 4027722 ~ 4028046 (+)
G431383 NA non-coding downstream 82991 4098749 ~ 4099046 (+)
G432537 NA non-coding downstream 184886 4200644 ~ 4200874 (+)
G432552 NA non-coding downstream 206454 4222212 ~ 4226252 (+)
CI01000306_02974291_02976718 TP53INP2 other upstream 1036328 2973156 ~ 2979157 (+)
G430719 NA other upstream 1864531 2148382 ~ 2150954 (+)
G432583 NA other downstream 310644 4326402 ~ 4327822 (+)
G432678 NA other downstream 506424 4522182 ~ 4522536 (+)
G432958 NA other downstream 1643170 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 1964755 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 2090385 6106143 ~ 6108175 (+)

Expression


Co-expression Network