XLOC_012807



Basic Information


Item Value
gene id XLOC_012807
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 23811384 ~ 23828058 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00027113
GCCAGGCAGCCTCCCCCCGGGGAAGGAAGTCAGCAAGCTCCTTTGCAACACACTCTCTGGTTCACAGGGTTCCAGTTTGATCAACCTTCCATctGAGTGATCTGTTCTGTTGCTGCGATCTGGATCTGACCTCAGAGCATGCGAGGTCAGTGTTTTGTCTACTGTCCGGTGACCAGCAACAACCTTTCTGATCCTGGAAAATGTCAGGCAGGTGAAATACTGGTCTCCTCTTATCGTGGATGATGGTACAACATCGTCTTGTAAATAATGTCACAATGTTGTTATCCAttacagttgtttttgttttatttggcacAATTTTCAAAACCAATAGGTCCATTTTCAAAACGCTTACTTAAATCACAACAGATCATCAAgtctttttttcaaacattttagcatatttttaattgtgttagTACAATAAACAATCACAAAATATCCTTTTCACTACATAAATTAAGTGTTTCATCTTAACTGTTTCATTCACAGTAACTGCCTTTTATAATACAATCACTATCAAACTTTTGATTTGCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00027113 True 537 lncRNA 0.39 2 23811384 23828058

Neighbor


gene id symbol gene type direction distance location
XLOC_012806 AL805905.1 coding upstream 339124 23472146 ~ 23472260 (+)
XLOC_012805 NA coding upstream 347843 23458929 ~ 23463541 (+)
XLOC_012804 mctp2a coding upstream 355283 23373683 ~ 23456101 (+)
XLOC_012803 mef2aa coding upstream 455307 23187419 ~ 23356077 (+)
XLOC_012802 cbfb coding upstream 738719 22994113 ~ 23072665 (+)
XLOC_012808 NA coding downstream 48382 23876440 ~ 23889042 (+)
XLOC_012809 CR847971.1 coding downstream 649468 24477526 ~ 24483285 (+)
XLOC_012810 lysmd4 coding downstream 734130 24562188 ~ 24572673 (+)
XLOC_012811 CT030043.1 coding downstream 814929 24642987 ~ 24643102 (+)
XLOC_012812 AL935295.1 coding downstream 909176 24737234 ~ 24740721 (+)
XLOC_012793 NA non-coding upstream 1711156 22099619 ~ 22100228 (+)
XLOC_012792 CT573204.1 non-coding upstream 1729631 22078144 ~ 22081753 (+)
XLOC_012790 NA non-coding upstream 2338020 21469636 ~ 21473364 (+)
XLOC_012816 NA non-coding downstream 1649736 25477794 ~ 25499608 (+)

Expression



Co-expression Network