Gene
RNA
| Item | Value |
|---|---|
| gene id | G432552 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 4222212 ~ 4226252 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU496682 | True | 483 | lncRNA | 0.53 | 2 | 4222212 | 4226252 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_04111278_04162816 | FBLN2 | coding | upstream | 58368 | 4110793 ~ 4163844 (+) |
| CI01000306_04077126_04078242 | NA | coding | upstream | 143681 | 4077126 ~ 4078531 (+) |
| CI01000306_04050451_04054257 | NA | coding | upstream | 167810 | 4050332 ~ 4054402 (+) |
| CI01000306_03889176_03889334 | NA | coding | upstream | 332841 | 3888348 ~ 3889371 (+) |
| CI01000306_03827847_03828735 | NA | coding | upstream | 393367 | 3825737 ~ 3828845 (+) |
| CI01000306_04253810_04255748 | BARX1 | coding | downstream | 26911 | 4253163 ~ 4256841 (+) |
| CI01000306_04454619_04454783 | NA | coding | downstream | 228367 | 4454619 ~ 4455552 (+) |
| CI01000306_04489350_04503649 | ALPL | coding | downstream | 263098 | 4489350 ~ 4505749 (+) |
| CI01000306_04570147_04574537 | NMUR3 | coding | downstream | 343531 | 4569783 ~ 4574728 (+) |
| CI01000306_04686121_04753101 | EPHB2, EPHB2B | coding | downstream | 459869 | 4686121 ~ 4753101 (+) |
| G432537 | NA | non-coding | upstream | 21338 | 4200644 ~ 4200874 (+) |
| G431383 | NA | non-coding | upstream | 123166 | 4098749 ~ 4099046 (+) |
| G431368 | NA | non-coding | upstream | 194166 | 4027722 ~ 4028046 (+) |
| G431364 | NA | non-coding | upstream | 205877 | 4015912 ~ 4016335 (+) |
| G431334 | NA | non-coding | upstream | 206454 | 4015485 ~ 4015758 (+) |
| G432592 | NA | non-coding | downstream | 5672 | 4231924 ~ 4232162 (+) |
| G432593 | NA | non-coding | downstream | 6029 | 4232281 ~ 4233063 (+) |
| G432622 | NA | non-coding | downstream | 73794 | 4300046 ~ 4300489 (+) |
| G432627 | NA | non-coding | downstream | 80397 | 4306649 ~ 4306870 (+) |
| G432628 | NA | non-coding | downstream | 80869 | 4307121 ~ 4307340 (+) |
| CI01000306_03807268_03810946 | NA | other | upstream | 413214 | 3807268 ~ 3811243 (+) |
| CI01000306_03778075_03781910 | MAP1LC3A, MAP1LC3A.L | other | upstream | 439193 | 3778052 ~ 3783019 (+) |
| CI01000306_03772689_03777211 | DYNLRB1 | other | upstream | 444662 | 3772689 ~ 3777550 (+) |
| CI01000306_02974291_02976718 | TP53INP2 | other | upstream | 1243055 | 2973156 ~ 2979157 (+) |
| G430719 | NA | other | upstream | 2071258 | 2148382 ~ 2150954 (+) |
| G432583 | NA | other | downstream | 100150 | 4326402 ~ 4327822 (+) |
| G432678 | NA | other | downstream | 295930 | 4522182 ~ 4522536 (+) |
| G432958 | NA | other | downstream | 1432676 | 5658928 ~ 5660169 (+) |
| CI01000306_05976516_05985251 | TMEM178A, TMEM178 | other | downstream | 1754261 | 5975822 ~ 5986288 (+) |
| CI01000306_06106248_06107449 | GM2573, CS056, WDR83OS | other | downstream | 1879891 | 6106143 ~ 6108175 (+) |
