G432627


Basic Information

Item Value
gene id G432627
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 4306649 ~ 4306870 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU496774
TGTCAGAGCTCTGATAATTATTTAGATCTGCCGCATACTTGTGGTAAGCAGGCTGAAACGCTCCCTTTTAAACGCTCCACTTTAAACTGACCAAAATTGAGCGAAGAATAATCCCTGTCAGTTGTAGTGGTCTGCCTCACATCAGCCTGGAAAAGCTTTAATACGACTGTGCCACATTCATTTCTGTAACATAAACGAACTCGATTCATTCTCCCATAGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU496774 True 222 lncRNA 0.43 1 4306649 4306870

Neighbor

gene id symbol gene type direction distance location
CI01000306_04253810_04255748 BARX1 coding upstream 49808 4253163 ~ 4256841 (+)
CI01000306_04111278_04162816 FBLN2 coding upstream 142805 4110793 ~ 4163844 (+)
CI01000306_04077126_04078242 NA coding upstream 228118 4077126 ~ 4078531 (+)
CI01000306_04050451_04054257 NA coding upstream 252247 4050332 ~ 4054402 (+)
CI01000306_03889176_03889334 NA coding upstream 417278 3888348 ~ 3889371 (+)
CI01000306_04454619_04454783 NA coding downstream 147749 4454619 ~ 4455552 (+)
CI01000306_04489350_04503649 ALPL coding downstream 182480 4489350 ~ 4505749 (+)
CI01000306_04570147_04574537 NMUR3 coding downstream 262913 4569783 ~ 4574728 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding downstream 379251 4686121 ~ 4753101 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding downstream 481300 4788170 ~ 4794154 (+)
G432622 NA non-coding upstream 6160 4300046 ~ 4300489 (+)
G432593 NA non-coding upstream 73586 4232281 ~ 4233063 (+)
G432592 NA non-coding upstream 74487 4231924 ~ 4232162 (+)
G432552 NA non-coding upstream 80397 4222212 ~ 4226252 (+)
G432537 NA non-coding upstream 105775 4200644 ~ 4200874 (+)
G432628 NA non-coding downstream 251 4307121 ~ 4307340 (+)
G432629 NA non-coding downstream 476 4307346 ~ 4307693 (+)
G432571 NA non-coding downstream 38159 4345029 ~ 4347871 (+)
G432568 NA non-coding downstream 53711 4360581 ~ 4362231 (+)
G432586 NA non-coding downstream 111322 4418192 ~ 4419629 (+)
CI01000306_03807268_03810946 NA other upstream 497651 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 523630 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 529099 3772689 ~ 3777550 (+)
CI01000306_02974291_02976718 TP53INP2 other upstream 1327492 2973156 ~ 2979157 (+)
G430719 NA other upstream 2155695 2148382 ~ 2150954 (+)
G432583 NA other downstream 19532 4326402 ~ 4327822 (+)
G432678 NA other downstream 215312 4522182 ~ 4522536 (+)
G432958 NA other downstream 1352058 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 1673643 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 1799273 6106143 ~ 6108175 (+)

Expression


Co-expression Network